BLASTX nr result

ID: Atractylodes21_contig00019717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019717
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...    72   4e-10
emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]    67   7e-09
ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|...    65   3e-08

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 675

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 44/96 (45%), Positives = 57/96 (59%)
 Frame = -1

Query: 1267 SGLVFICTNLGHNAGQLFNVLDHRVETYKRGRTAFEINYDLLRKGDSLETRFVLGKVILN 1088
            SGLVF+   + ++  QLFNVL   VE+YK  R +F I+Y LL KG+  ETRFVLGKVIL 
Sbjct: 447  SGLVFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHETRFVLGKVILE 506

Query: 1087 TMGCGVHHDGDPNEDNYHGPFGPKKEHRVNQKEDRK 980
            T+  G+    +  ED      GPK    + +K D K
Sbjct: 507  TLSGGLTKGVEVAED------GPKV---IEEKHDSK 533


>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
 Frame = -1

Query: 1258 VFICTNLGHNAGQLFNVLDHRVETYKRGRTAFEINYDLLRKGDSLETRFVLGKVILNTMG 1079
            VF+   +      +FNVL + +E+Y+ GR + +I+Y LL KGD  ETRFVLGKVI++TM 
Sbjct: 458  VFVQKRMAERVAHIFNVLVNGIESYEEGRESPDIDYYLLGKGDLRETRFVLGKVIMDTMS 517

Query: 1078 CGVHHDGD---PNEDNYHGPFGPKK----------------EHRVNQKEDRKQPPFPFNL 956
              +   G      ++  H  +  +K                +H V  KED+K+    FN 
Sbjct: 518  SELVQMGTEVLEEKNQLHMSYNEQKPEALEQDCHPILYEVVKHLVVAKEDKKRSLSSFNP 577

Query: 955  DLHRGSTPKTQKVIAKLSSIMQQRPGQG---VSTKHTEVVGISSNPKNED-RTMDKPEIS 788
            +L +    K + V  +   + Q+   +     + KH E+       +NE  + M K  + 
Sbjct: 578  ELQQERGKKQKLVDIEFDPLEQEIAKENQKEKNNKHQEIAKKQEMAENEQHQEMAKKHLK 637

Query: 787  M 785
            M
Sbjct: 638  M 638


>ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|355513659|gb|AES95282.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 675

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
 Frame = -1

Query: 1261 LVFICTNLGHNAGQLFNVLDHRVETYKRGRTAFEINYDLLRKGDSLETRFVLGKVILNTM 1082
            ++ +    G    ++F VL + ++ YK  R + +INYD+L  G + ETRFVLGK++L TM
Sbjct: 419  VLVVSKKTGKAVSEIFEVLVNDIKFYKSERKSAKINYDMLGSGHTSETRFVLGKIVLQTM 478

Query: 1081 GCGVHHDGD--PNEDNYHGPFGPKKEHRVNQKEDRKQPPFPFNLDLHRGSTPKTQKVIAK 908
              G+  D D    E  +    G K   ++  +ED+++     NL+ HR    K QK +A+
Sbjct: 479  QSGIIGDADGFGTEKCHPDTEGTKDFGQLVTREDKRKVLSTPNLE-HRPQKLKKQK-LAE 536

Query: 907  LSSIMQQRPGQGVSTKHTE 851
             + I +Q+ G     K+ E
Sbjct: 537  NACIEEQKTGLDEFCKYKE 555


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