BLASTX nr result

ID: Atractylodes21_contig00019703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019703
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   137   6e-30
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   130   4e-28
ref|XP_002867017.1| ribosomal protein L12 family protein [Arabid...   128   3e-27
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   125   2e-26
ref|NP_195360.1| Ribosomal protein L12 family protein [Arabidops...   124   3e-26

>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  137 bits (344), Expect = 6e-30
 Identities = 79/125 (63%), Positives = 88/125 (70%)
 Frame = -2

Query: 816 SNPSTPSSRVSEIVNELMNLTLLESADLTELMRKKMGINEMPIMAVMMPGMGLXXXXXXX 637
           S+   PS RVS IV+E+  LTLLE +DLTEL+RKK+ INEMP+MAVMMPGMG        
Sbjct: 47  SSAQVPSERVSSIVDEISGLTLLEVSDLTELLRKKLDINEMPVMAVMMPGMGF--GVRGA 104

Query: 636 XXXXXXXXXXXXXXXXAFDLKLEGGFDAGSKIKIIKEVRTFTDLGLKEAKELVEKAPTLL 457
                           AFDLKLE  FDA +KIKIIKEVRTFTDLGLKEAK+LVE APTLL
Sbjct: 105 GGAAPKAAEVKAAEKTAFDLKLE-AFDAAAKIKIIKEVRTFTDLGLKEAKDLVEHAPTLL 163

Query: 456 KKGVP 442
           KKGVP
Sbjct: 164 KKGVP 168


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  130 bits (328), Expect = 4e-28
 Identities = 84/174 (48%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
 Frame = -2

Query: 963 YYQRISQSLLRHQFRLLGFPSSNLIESHPPQCTHLHTLRRFCSSPQQSDSNPSTPSSRVS 784
           +++ IS  L R +  L   P+ N  +S  P+  +L  + +F S  Q+   NP  PS +V+
Sbjct: 3   HFRLISPHLSRIRKTLFRNPTFNP-QSTIPRSPNL--IYQFTSIAQEP--NPPAPSDKVA 57

Query: 783 EIVNELMNLTLLESADLTELMRKKMGINEMPIMAVMMPGMGLXXXXXXXXXXXXXXXXXX 604
            +V+E+  LTLLE +DLTE++R K+ I EMP+MAVMMPGMG                   
Sbjct: 58  ALVDEISELTLLEISDLTEVLRNKLDIKEMPVMAVMMPGMGFSGMKGGVKGGAAGAAKAE 117

Query: 603 XXXXXA-FDLKLEGGFDAGSKIKIIKEVRTFTDLGLKEAKELVEKAPTLLKKGV 445
                  FD+KLEG FDA +KIK+IKEVR FTDLGLKEAK+LVEKAPTLLKKGV
Sbjct: 118 EKVEKTVFDVKLEG-FDAAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLKKGV 170


>ref|XP_002867017.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297312853|gb|EFH43276.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score =  128 bits (321), Expect = 3e-27
 Identities = 77/149 (51%), Positives = 99/149 (66%)
 Frame = -2

Query: 891 IESHPPQCTHLHTLRRFCSSPQQSDSNPSTPSSRVSEIVNELMNLTLLESADLTELMRKK 712
           IE+HP    HL +++       +S S+P+T S  VS+IVNEL NLTLLE+ DLTE++R+K
Sbjct: 18  IETHPSS-NHLFSIQ------SRSYSSPATQSENVSKIVNELSNLTLLETMDLTEILRQK 70

Query: 711 MGINEMPIMAVMMPGMGLXXXXXXXXXXXXXXXXXXXXXXXAFDLKLEGGFDAGSKIKII 532
           + I+E+P+MA MMPGM                         AFD+ L+  ++A SKIK+I
Sbjct: 71  LDISELPVMAAMMPGMSF-PGSGAGKSTGGEGKEKKKEAKTAFDVMLQ-AYEAVSKIKVI 128

Query: 531 KEVRTFTDLGLKEAKELVEKAPTLLKKGV 445
           KEVRT TDLGLKEAK+LVEKAPTLLKKGV
Sbjct: 129 KEVRTITDLGLKEAKDLVEKAPTLLKKGV 157


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  125 bits (313), Expect = 2e-26
 Identities = 72/126 (57%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = -2

Query: 819 DSNPSTPSSRVSEIVNELMNLTLLESADLTELMRKKMGINEMPIMAVMMPGMGLXXXXXX 640
           +S P+ PS RVS IV+E+  LTLLE ADLTE++R+K+ + EMP+M +MMPGMG       
Sbjct: 57  ESRPA-PSERVSAIVDEISGLTLLEVADLTEVLREKLDVKEMPVMTMMMPGMGFGGFRGA 115

Query: 639 XXXXXXXXXXXXXXXXXA-FDLKLEGGFDAGSKIKIIKEVRTFTDLGLKEAKELVEKAPT 463
                              FD+KL+  FDA SKIKIIKEVRTFT+LGLKEAK+LVEKAPT
Sbjct: 116 GKGGPGAKGVEEKKEEKTAFDVKLDA-FDAASKIKIIKEVRTFTNLGLKEAKDLVEKAPT 174

Query: 462 LLKKGV 445
           LLKKGV
Sbjct: 175 LLKKGV 180


>ref|NP_195360.1| Ribosomal protein L12 family protein [Arabidopsis thaliana]
           gi|13878063|gb|AAK44109.1|AF370294_1 putative ribosomal
           protein [Arabidopsis thaliana]
           gi|4006919|emb|CAB16813.1| ribosomal protein
           [Arabidopsis thaliana] gi|7270590|emb|CAB80308.1|
           ribosomal protein [Arabidopsis thaliana]
           gi|15450415|gb|AAK96501.1| At4g36420/C7A10_940
           [Arabidopsis thaliana] gi|17104653|gb|AAL34215.1|
           putative ribosomal protein [Arabidopsis thaliana]
           gi|332661254|gb|AEE86654.1| Ribosomal protein L12 family
           protein [Arabidopsis thaliana]
          Length = 179

 Score =  124 bits (312), Expect = 3e-26
 Identities = 72/127 (56%), Positives = 89/127 (70%)
 Frame = -2

Query: 825 QSDSNPSTPSSRVSEIVNELMNLTLLESADLTELMRKKMGINEMPIMAVMMPGMGLXXXX 646
           +S S+P+T S  VS+IVNEL NLTLLE+ DLTE++R+K+ I+E+P+MA MMPGM L    
Sbjct: 33  RSYSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSL-PGS 91

Query: 645 XXXXXXXXXXXXXXXXXXXAFDLKLEGGFDAGSKIKIIKEVRTFTDLGLKEAKELVEKAP 466
                              AFD+ L+  +DA SKIK+IKEVRT T LGLKEAK+LVEKAP
Sbjct: 92  GASKSAGGEGKEKKKEAKTAFDVMLQ-AYDAVSKIKVIKEVRTITALGLKEAKDLVEKAP 150

Query: 465 TLLKKGV 445
           TLLKKGV
Sbjct: 151 TLLKKGV 157


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