BLASTX nr result

ID: Atractylodes21_contig00019692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019692
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...   158   4e-37
ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus co...   135   3e-30
ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...   130   1e-28
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...   127   9e-28

>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/137 (57%), Positives = 104/137 (75%), Gaps = 2/137 (1%)
 Frame = -2

Query: 405 MLLLRNRILNFPVSLSFGTFIKHLERA--SNLKPTAITRRSATTKSSTINVSHFETLNPL 232
           ML+ R ++      LS GTF+K +  +  +  +P  I  ++ TT +  +N S+FETLNPL
Sbjct: 1   MLVWRGKVPGVSSPLSVGTFVKQVTTSISTRFRPHRIATKTLTT-TKVLNSSYFETLNPL 59

Query: 231 QKQQVQLYVDALLDWNQKMNLTAVREASDVMDRHIEDSLAIIPPIQSSYVSHCDTSFENL 52
           QKQQ+ LYVDALL WNQKMNLTAV +A +VM+RH+ DSLA+IPPIQSSY++HCD+S  N+
Sbjct: 60  QKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNI 119

Query: 51  NVVDVGSGAGLPGLILA 1
           ++VDVGSG GLPGLILA
Sbjct: 120 SLVDVGSGPGLPGLILA 136


>ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 7/142 (4%)
 Frame = -2

Query: 405 MLLLRNRILNFPVSLSFGTFIKHLERASNLKPTA-----ITRRSATTKSS--TINVSHFE 247
           ML+ R +    P  LS GTF+KH    S ++P A     I  +S T  +S  T N S F+
Sbjct: 1   MLVWRCKPPAVPFPLSLGTFVKHF---SVIEPKAFPLHRIKAKSLTAAASIGTHNSSCFD 57

Query: 246 TLNPLQKQQVQLYVDALLDWNQKMNLTAVREASDVMDRHIEDSLAIIPPIQSSYVSHCDT 67
           + +  QK+Q++LYVD LL WNQKMNLTAV +  +VM+RHIEDSLAI+PPIQ SYVSHC+ 
Sbjct: 58  SFSCRQKKQIRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNA 117

Query: 66  SFENLNVVDVGSGAGLPGLILA 1
           S +++ +VDVG+GAGLPGL+LA
Sbjct: 118 SIDSIKLVDVGTGAGLPGLVLA 139


>ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
           gi|223550574|gb|EEF52061.1| Methyltransferase gidB,
           putative [Ricinus communis]
          Length = 282

 Score =  135 bits (341), Expect = 3e-30
 Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 LLLRNRILNFPVSLSFGTFIKHLERASNLKPTAITRRSATTKSSTI--NVSHFETLNPLQ 229
           +L+R   +N P+  S G F + L  A  LK ++  R +A   ++T     S FE+LN  Q
Sbjct: 1   MLVRLCRINVPLCFSVGNFTERLPVAK-LKASSPRRINAKALTATAIHTTSCFESLNSRQ 59

Query: 228 KQQVQLYVDALLDWNQKMNLTAVREASDVMDRHIEDSLAIIPPIQSSYVSHCDTSFENLN 49
           K+Q++ YVDALL+WNQKMNLTAV EA++VM RHIEDSLA++ PI+ SY+SHC +S +NL 
Sbjct: 60  KEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSSSIDNLK 119

Query: 48  VVDVGSGAGLPGLILA 1
           +VDVG+G GLPGLILA
Sbjct: 120 LVDVGTGPGLPGLILA 135


>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/130 (54%), Positives = 88/130 (67%), Gaps = 7/130 (5%)
 Frame = -2

Query: 369 VSLSFGTFIKHLERASNLKP------TAITRRSATTKSSTINVSHFETLNPLQKQQVQLY 208
           VS S  TFIK         P      T+  R + T  SS     HFETL   QK QV L+
Sbjct: 5   VSFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRF--LHFETLTSRQKDQVHLF 62

Query: 207 VDALLDWNQKMNLTAVREASDVMDRHIEDSLAIIPPIQSSYVSHCDTS-FENLNVVDVGS 31
           VDALL WNQKMNLTA+ E ++VM+RH+EDSLAIIPPI++ Y+SHC TS  +++ +VDVG+
Sbjct: 63  VDALLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDVGT 122

Query: 30  GAGLPGLILA 1
           GAGLPGLI+A
Sbjct: 123 GAGLPGLIIA 132


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
           truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA
           small subunit methyltransferase G [Medicago truncatula]
          Length = 518

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/140 (49%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
 Frame = -2

Query: 411 AKMLLLRNRILNFPVSLSFGTFIKHLERASNLKPTAITRRSATT---KSSTINVSHFETL 241
           ++M+LL N +       S  TF KHL           T R  TT    +ST N+SHF TL
Sbjct: 233 SEMVLLFNNL-----QFSRWTFFKHL-----------TPRKYTTLCQNNSTSNLSHFLTL 276

Query: 240 NPLQKQQVQLYVDALLDWNQKMNLTAVREASDVMDRHIEDSLAIIPPIQSSYVSHCDTSF 61
              QK Q+ LYVD LL WN++MNLTAV+E ++VM+RHIEDSLAI+PP+  +Y+SH   S 
Sbjct: 277 TSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSI 336

Query: 60  ENLNVVDVGSGAGLPGLILA 1
           + + +VDVG+GAGLPG++LA
Sbjct: 337 DKVKLVDVGTGAGLPGVVLA 356


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