BLASTX nr result

ID: Atractylodes21_contig00019515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019515
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   516   e-144
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   502   e-140
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   497   e-138
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   474   e-131
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   471   e-130

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
            gi|297740757|emb|CBI30939.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  516 bits (1328), Expect = e-144
 Identities = 264/341 (77%), Positives = 288/341 (84%)
 Frame = +2

Query: 2    MELQSAIDILVATPGRLMDHINNTKGFTLEHLRFLVVDETDRLLRESYQSWLPTVLQCTR 181
            +ELQS++DILVATPGRLMDHIN TKGFTL+HLR+LVVDETDRLLRE+YQSWLPTVLQ TR
Sbjct: 168  LELQSSVDILVATPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTR 227

Query: 182  SSVDGLIAYASTPLPSTFGPLKTIRRLGVERGFKSKPYPRLVKMVLSATLTQDPSKLAQL 361
            SS + L     T LPSTFG + TIRR GVERGFK + YPRLVK+VLSATLTQDPSKLA L
Sbjct: 228  SSDESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALL 287

Query: 362  DLHHPLFLTTGQIRYQLPKQLESFKLICEPKLKPLYLVTLLQSLQGEKCIVFTSSVESTH 541
            DLHHPL LT GQ RYQLP++L+SFKLICE KLKPLYLV LL+ L GEKCIVFTSSVES H
Sbjct: 288  DLHHPLLLTAGQRRYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAH 347

Query: 542  RLCTLLKFFGDLGIKIKEYSGHQHQTVRSKTLRGFREGGIQVLVSSDAMTRGMDVVGVRN 721
            RLCTLL FFGDL IKI EYSG QHQ VRSKTL  FR G IQVL+SSD MTRGMDV GVRN
Sbjct: 348  RLCTLLNFFGDLQIKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRN 407

Query: 722  VINYDKPPYIKTYIHRAGRTARAGNSGRCFTLLHEDEVKRFKKLLQKADIDSCPVHTVPS 901
            VINYD P +IKTYIHRAGRTARAG +GRCFTLL +DE KRFK+LLQKAD DSCPVH+V S
Sbjct: 408  VINYDVPKFIKTYIHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVAS 467

Query: 902  DSIESLRSTYASALEKLKESVEMETFKKRKIGFKSLSKTKR 1024
            +SIE+L S Y SALEKLKE+V  ET +KRKI FKS    KR
Sbjct: 468  NSIEALHSVYVSALEKLKETVVSETTRKRKINFKSSGADKR 508


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  502 bits (1292), Expect = e-140
 Identities = 252/333 (75%), Positives = 282/333 (84%)
 Frame = +2

Query: 5    ELQSAIDILVATPGRLMDHINNTKGFTLEHLRFLVVDETDRLLRESYQSWLPTVLQCTRS 184
            ELQS++DILVATPGRLMDHI  TKGFTLEHL +LVVDETDRLLRESYQSWLPTVL+ TR 
Sbjct: 172  ELQSSVDILVATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRP 231

Query: 185  SVDGLIAYASTPLPSTFGPLKTIRRLGVERGFKSKPYPRLVKMVLSATLTQDPSKLAQLD 364
              + L+   +  LP   G LKTIRR GVERGFK K YPRL KMVLSATLTQDPSKLAQL+
Sbjct: 232  YDESLVPGVNNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLN 291

Query: 365  LHHPLFLTTGQIRYQLPKQLESFKLICEPKLKPLYLVTLLQSLQGEKCIVFTSSVESTHR 544
            LHHPLFLTTGQ RYQLP++LES+KLIC  KLKPLYLV +LQ L GEKCIVFTSSVESTHR
Sbjct: 292  LHHPLFLTTGQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHR 351

Query: 545  LCTLLKFFGDLGIKIKEYSGHQHQTVRSKTLRGFREGGIQVLVSSDAMTRGMDVVGVRNV 724
            LCTLL FFGDL +KIKEYSG Q Q+VRSKTL+ FREG IQVLVSSDAMTRGMD+ GVRN+
Sbjct: 352  LCTLLNFFGDLKVKIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNI 411

Query: 725  INYDKPPYIKTYIHRAGRTARAGNSGRCFTLLHEDEVKRFKKLLQKADIDSCPVHTVPSD 904
            INYD P Y+KTY+HRAGRTARAG +GRC TLL   EVKRFKKLLQKAD DSCP++++PS 
Sbjct: 412  INYDMPAYVKTYVHRAGRTARAGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSS 471

Query: 905  SIESLRSTYASALEKLKESVEMETFKKRKIGFK 1003
            S++SL   Y SALEKLKE+V+ ET +K K+G K
Sbjct: 472  SVKSLHPFYLSALEKLKETVQSETSRKGKVGIK 504


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus]
          Length = 517

 Score =  497 bits (1279), Expect = e-138
 Identities = 253/331 (76%), Positives = 280/331 (84%)
 Frame = +2

Query: 2    MELQSAIDILVATPGRLMDHINNTKGFTLEHLRFLVVDETDRLLRESYQSWLPTVLQCTR 181
            +ELQS++DILVATPGRLMDHIN TKGFTL+HLR+LV+DETDRLLRE+YQSWLPTVLQ T 
Sbjct: 168  VELQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTH 227

Query: 182  SSVDGLIAYASTPLPSTFGPLKTIRRLGVERGFKSKPYPRLVKMVLSATLTQDPSKLAQL 361
            +    +I  +    P + G LKTIRR GVERGFK KPYPRL KMVLSATLTQDP KLAQL
Sbjct: 228  ADDSSIIFPSYISNPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQL 287

Query: 362  DLHHPLFLTTGQIRYQLPKQLESFKLICEPKLKPLYLVTLLQSLQGEKCIVFTSSVESTH 541
            DLHHPLFLTTG+ RY+LP++LES+ +ICE KLKPLYLV LLQSL  EKCIVFTSSVESTH
Sbjct: 288  DLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTH 347

Query: 542  RLCTLLKFFGDLGIKIKEYSGHQHQTVRSKTLRGFREGGIQVLVSSDAMTRGMDVVGVRN 721
            RLC+LL FF DL +KIKEYSG Q Q++RSKTL  FR G IQVLVSSDAMTRGMDV GV+N
Sbjct: 348  RLCSLLNFFEDLELKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKN 407

Query: 722  VINYDKPPYIKTYIHRAGRTARAGNSGRCFTLLHEDEVKRFKKLLQKADIDSCPVHTVPS 901
            VINYD P +IKTYIHRAGRTARAG SGRCFTLL +DEVKRFKKLLQKAD DSCPVH +PS
Sbjct: 408  VINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPS 467

Query: 902  DSIESLRSTYASALEKLKESVEMETFKKRKI 994
             SIE L+ TY SALEKLKE VE ET +K  I
Sbjct: 468  SSIEFLQPTYVSALEKLKEKVESETSRKSTI 498


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
            lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
            ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  474 bits (1219), Expect = e-131
 Identities = 235/336 (69%), Positives = 277/336 (82%)
 Frame = +2

Query: 11   QSAIDILVATPGRLMDHINNTKGFTLEHLRFLVVDETDRLLRESYQSWLPTVLQCTRSSV 190
            +SA+DILVATPGRLMDHINNTKGFTLEHLR+LVVDETDRLLRE+YQSWLPTVLQ T++S 
Sbjct: 173  ESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSD 232

Query: 191  DGLIAYASTPLPSTFGPLKTIRRLGVERGFKSKPYPRLVKMVLSATLTQDPSKLAQLDLH 370
            DGL    +  +PS FG L+T+RR  VERGFK KPYPRLVKMVLSATLTQDPSKL QLDLH
Sbjct: 233  DGLFPSCTPFVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLH 292

Query: 371  HPLFLTTGQIRYQLPKQLESFKLICEPKLKPLYLVTLLQSLQGEKCIVFTSSVESTHRLC 550
            HPLF+TTG  RY+LP++LE  +LICE  +KP+YLV LL+S +GEKCI+FTSSVE+T RLC
Sbjct: 293  HPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLC 352

Query: 551  TLLKFFGDLGIKIKEYSGHQHQTVRSKTLRGFREGGIQVLVSSDAMTRGMDVVGVRNVIN 730
             LL FFGD  IK KEYSG  +Q+VRSK L+ FR+G IQVLV+SDA+TRGMDV GV NVIN
Sbjct: 353  KLLNFFGDPKIKAKEYSGGLNQSVRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVIN 412

Query: 731  YDKPPYIKTYIHRAGRTARAGNSGRCFTLLHEDEVKRFKKLLQKADIDSCPVHTVPSDSI 910
            YD PP+ KT+IHRAGRTARAG +GRCFTLL   EV+RF KLL+K   DSCP++ +P  S+
Sbjct: 413  YDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLKKVGSDSCPIYPIPPTSL 472

Query: 911  ESLRSTYASALEKLKESVEMETFKKRKIGFKSLSKT 1018
            +S+R+TY  ALEKLKE VE E  KK +  F+  S+T
Sbjct: 473  DSIRATYTPALEKLKELVESEAPKKGRQAFRHNSRT 508


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
            gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box
            ATP-dependent RNA helicase 1 gi|332658259|gb|AEE83659.1|
            RNA helicase 1 [Arabidopsis thaliana]
          Length = 522

 Score =  471 bits (1212), Expect = e-130
 Identities = 234/337 (69%), Positives = 277/337 (82%)
 Frame = +2

Query: 8    LQSAIDILVATPGRLMDHINNTKGFTLEHLRFLVVDETDRLLRESYQSWLPTVLQCTRSS 187
            L+SA+DILVATPGRLMDHINNTKGFTLEHLR+LVVDETDRLLRE+YQSWLPTVLQ T++S
Sbjct: 172  LESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTS 231

Query: 188  VDGLIAYASTPLPSTFGPLKTIRRLGVERGFKSKPYPRLVKMVLSATLTQDPSKLAQLDL 367
             D L    +  +PS FG L+T+RR  VERGFK KPYPRLVKMVLSATLTQDPSKL QLDL
Sbjct: 232  DDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDL 291

Query: 368  HHPLFLTTGQIRYQLPKQLESFKLICEPKLKPLYLVTLLQSLQGEKCIVFTSSVESTHRL 547
            HHPLF+TTG  RY+LP++LE  +LICE  +KP+YLV LL+S +GEKCI+FTSSVE+T RL
Sbjct: 292  HHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRL 351

Query: 548  CTLLKFFGDLGIKIKEYSGHQHQTVRSKTLRGFREGGIQVLVSSDAMTRGMDVVGVRNVI 727
            C LL FFGD  IK KEYSG  +Q++RSK L+ FR+G IQVLV+SDA+TRGMDV GV NVI
Sbjct: 352  CKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVI 411

Query: 728  NYDKPPYIKTYIHRAGRTARAGNSGRCFTLLHEDEVKRFKKLLQKADIDSCPVHTVPSDS 907
            NYD PP+ KT+IHRAGRTARAG +GRCFTLL   EV+RF KLL+K   DSCP++ +P  S
Sbjct: 412  NYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTS 471

Query: 908  IESLRSTYASALEKLKESVEMETFKKRKIGFKSLSKT 1018
            ++S+R+TY  ALEKLKE VE E  KK +  F+  S+T
Sbjct: 472  LDSIRATYTPALEKLKELVESEAPKKGRQAFRHNSRT 508


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