BLASTX nr result

ID: Atractylodes21_contig00019473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019473
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154611.1| Ribosomal protein S5/Elongation factor G/III...    43   4e-08
ref|NP_001189873.1| Ribosomal protein S5/Elongation factor G/III...    43   4e-08

>ref|NP_001154611.1| Ribosomal protein S5/Elongation factor G/III/V family protein
           [Arabidopsis thaliana] gi|332641739|gb|AEE75260.1|
           Ribosomal protein S5/Elongation factor G/III/V family
           protein [Arabidopsis thaliana]
          Length = 820

 Score = 43.1 bits (100), Expect(2) = 4e-08
 Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = -1

Query: 243 LLVVESFGLSG---AATLGQAFLQSVVDHLDMMSSNLQEKRFEGA 118
           L VVESFG SG   AAT GQAF Q V DH DMMSS+  E   + A
Sbjct: 750 LPVVESFGFSGQLRAATSGQAFPQCVFDHWDMMSSDPLETGSQAA 794



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -2

Query: 416 VWCQQEWGTPVCLPPADAT*QIQSPLCAASQQTLDMN*RRGNMFE-MQRPGTPLYNIKSC 240
           ++  Q    P  L P     +IQ+P  A       +N +RG++FE MQRPGTPLYNIK+ 
Sbjct: 691 IYASQLTAKPRLLEPVYMV-EIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 749

Query: 239 L 237
           L
Sbjct: 750 L 750


>ref|NP_001189873.1| Ribosomal protein S5/Elongation factor G/III/V family protein
           [Arabidopsis thaliana] gi|332641740|gb|AEE75261.1|
           Ribosomal protein S5/Elongation factor G/III/V family
           protein [Arabidopsis thaliana]
          Length = 767

 Score = 43.1 bits (100), Expect(2) = 4e-08
 Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = -1

Query: 243 LLVVESFGLSG---AATLGQAFLQSVVDHLDMMSSNLQEKRFEGA 118
           L VVESFG SG   AAT GQAF Q V DH DMMSS+  E   + A
Sbjct: 697 LPVVESFGFSGQLRAATSGQAFPQCVFDHWDMMSSDPLETGSQAA 741



 Score = 40.0 bits (92), Expect(2) = 4e-08
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -2

Query: 416 VWCQQEWGTPVCLPPADAT*QIQSPLCAASQQTLDMN*RRGNMFE-MQRPGTPLYNIKSC 240
           ++  Q    P  L P     +IQ+P  A       +N +RG++FE MQRPGTPLYNIK+ 
Sbjct: 638 IYASQLTAKPRLLEPVYMV-EIQAPEGALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 696

Query: 239 L 237
           L
Sbjct: 697 L 697


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