BLASTX nr result

ID: Atractylodes21_contig00019407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019407
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|NP_180537.1| pentatricopeptide repeat-containing protein [Ar...    88   8e-16
dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]     86   2e-15

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -3

Query: 310 LRVCGDCHNVAKLISKLYDREILLRDRYRFHHFKAGDCSCKDYW 179
           LRVCGDCH+VAKL+SKLYDREILLRDRYRFHHF+ G CSC DYW
Sbjct: 609 LRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 652


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -3

Query: 310 LRVCGDCHNVAKLISKLYDREILLRDRYRFHHFKAGDCSCKDYW 179
           LRVCGDCH+VAKL+SKLYDREILLRDRYRFHHF+ G CSC DYW
Sbjct: 700 LRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = -3

Query: 310 LRVCGDCHNVAKLISKLYDREILLRDRYRFHHFKAGDCSCKDYW 179
           LRVCGDCH+VAKLISKLY+R+ILLRDRYRFHHF  G+CSC DYW
Sbjct: 695 LRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738


>ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 738

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = -3

Query: 310 LRVCGDCHNVAKLISKLYDREILLRDRYRFHHFKAGDCSCKDYW 179
           LRVCGDCH+VAKLIS+LYDREI++RDRYRFHHF+ G CSC D+W
Sbjct: 695 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738


>dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -3

Query: 310 LRVCGDCHNVAKLISKLYDREILLRDRYRFHHFKAGDCSCKDYW 179
           LR+CGDCH V KLISK+YDREI++RDR RFHHFK G+CSCKDYW
Sbjct: 553 LRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596


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