BLASTX nr result

ID: Atractylodes21_contig00019385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019385
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...   586   e-165
emb|CBI16387.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   570   e-160
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2...   533   e-149
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...   528   e-147

>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 447

 Score =  586 bits (1510), Expect = e-165
 Identities = 294/413 (71%), Positives = 324/413 (78%), Gaps = 7/413 (1%)
 Frame = -3

Query: 1269 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1090
            +S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH  
Sbjct: 35   TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94

Query: 1089 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 910
            AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95   AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154

Query: 909  RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 730
            R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155  RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214

Query: 729  KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 571
            KTT FQQQY  A K LY      T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF 
Sbjct: 215  KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274

Query: 570  QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 391
            QFGE+VY KIPA +GCGFVQF  RTSAEEAIQRM G+ IGQ VV +SWG+S TAKQD  G
Sbjct: 275  QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334

Query: 390  VWNPQADPTQWGSXXXXXXXXXXXXXXXATQDPSLXXXXXXXXXXXXXXXXXGAQDMGAV 211
             W  QADP+QW S               ATQDPSL                 G QD+ A+
Sbjct: 335  SWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQQAEGVQDLAAM 394

Query: 210  AGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKTSSVSLQA 52
            AG  P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILGR LW KTS  S  A
Sbjct: 395  AGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 447


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  576 bits (1484), Expect = e-162
 Identities = 291/413 (70%), Positives = 321/413 (77%), Gaps = 7/413 (1%)
 Frame = -3

Query: 1269 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1090
            +S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH  
Sbjct: 35   TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94

Query: 1089 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 910
            AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95   AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154

Query: 909  RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 730
            R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155  RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214

Query: 729  KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 571
            KTT FQQQY  A K LY      T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF 
Sbjct: 215  KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274

Query: 570  QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 391
            QFGE+VY KIPA +GCGFVQF  RTSAEEAIQRM G+ IGQ VV +SWG+S TAKQD  G
Sbjct: 275  QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334

Query: 390  VWNPQADPTQWGSXXXXXXXXXXXXXXXATQDPSLXXXXXXXXXXXXXXXXXGAQDMGAV 211
             W  QADP+QW S               ATQDPSL                     + A+
Sbjct: 335  SWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQQARYY--LAAM 392

Query: 210  AGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKTSSVSLQA 52
            AG  P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILGR LW KTS  S  A
Sbjct: 393  AGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 445


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 438

 Score =  570 bits (1469), Expect = e-160
 Identities = 290/413 (70%), Positives = 320/413 (77%), Gaps = 7/413 (1%)
 Frame = -3

Query: 1269 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1090
            +S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH  
Sbjct: 35   TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94

Query: 1089 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 910
            AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95   AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154

Query: 909  RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 730
            R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155  RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214

Query: 729  KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 571
            KTT FQQQY  A K LY      T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF 
Sbjct: 215  KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274

Query: 570  QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 391
            QFGE+VY KIPA +GCGFVQF  RTSAEEAIQRM G+ IGQ VV +SWG+S TAK     
Sbjct: 275  QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAK----- 329

Query: 390  VWNPQADPTQWGSXXXXXXXXXXXXXXXATQDPSLXXXXXXXXXXXXXXXXXGAQDMGAV 211
                QADP+QW S               ATQDPSL                 G QD+ A+
Sbjct: 330  ----QADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQQAEGVQDLAAM 385

Query: 210  AGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKTSSVSLQA 52
            AG  P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILGR LW KTS  S  A
Sbjct: 386  AGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 438


>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  533 bits (1372), Expect = e-149
 Identities = 276/408 (67%), Positives = 299/408 (73%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1260 EEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGTAER 1081
            EE+RTLWIGDL YWADESYL S FA T EV+SIK+IRNK TG PEGYGFVEF SH  AER
Sbjct: 17   EEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAER 76

Query: 1080 VLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETFRTQ 901
            +LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETFR  
Sbjct: 77   ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVH 136

Query: 900  YPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPKKTT 721
            YPSVRGAKVVTDPNTGRSKGYGFVKFADE E+NRAMTEMNG++CSTRPMRIS ATPKKTT
Sbjct: 137  YPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTT 196

Query: 720  VFQQQYVAPKGL-----YTAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFLQFGEI 556
             FQQQY  PK       YTAPV  +  D D+TNTTI++GNLDP  TEE+LRQ FLQ GEI
Sbjct: 197  SFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEI 256

Query: 555  VYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSGVWNPQ 376
               KIPA +GCGFVQF  RTSAEEAIQRM G  IGQ  V +SWGK    KQD +  W  Q
Sbjct: 257  ASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGK----KQDLTATWGQQ 312

Query: 375  ADPTQWGSXXXXXXXXXXXXXXXATQDPSLXXXXXXXXXXXXXXXXXGAQDMGAVAGVAP 196
             D  QW +                T DPSL                 GA DM   AGV P
Sbjct: 313  VD--QWNA-YYGYGQGYDAYAYGGTHDPSLYAYNAYAGYPQYPQQVEGAPDM---AGVVP 366

Query: 195  PVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKTSSVSLQA 52
              E REE YDPLA PDVDKLN+AYL+ HGSAI GR LW KTSS++ QA
Sbjct: 367  VAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRTLWMKTSSLTQQA 414


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
            sativus]
          Length = 422

 Score =  528 bits (1359), Expect = e-147
 Identities = 272/407 (66%), Positives = 296/407 (72%), Gaps = 5/407 (1%)
 Frame = -3

Query: 1260 EEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGTAER 1081
            EE+RTLWIGDL YW DESYL+S FA T EV+SIK+IRNK TG PEGYGFVEF SH  AER
Sbjct: 17   EEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 76

Query: 1080 VLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETFRTQ 901
            +LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETFR Q
Sbjct: 77   ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQ 136

Query: 900  YPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPKKTT 721
            YPSVRGAKVVTDPNTGRSKGYGFVKFADE E+NRAM+EMNG+YCSTRPMRISAATPKKT 
Sbjct: 137  YPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTI 196

Query: 720  VFQQQYVAPKGLYTAP-----VPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFLQFGEI 556
              QQQY   K +Y  P     VP +P D D  NTTI++GNLDP +TEEEL+Q FLQFGEI
Sbjct: 197  GVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEI 256

Query: 555  VYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSGVWNPQ 376
             Y KIPA KGCGFVQF  R SAEEAIQ+M G  IGQ VV  SWG++  AKQD +  W  Q
Sbjct: 257  AYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLT-TWGQQ 315

Query: 375  ADPTQWGSXXXXXXXXXXXXXXXATQDPSLXXXXXXXXXXXXXXXXXGAQDMGAVAGVAP 196
             DP QW S                 QDPSL                 G QD+  VAG  P
Sbjct: 316  VDPNQW-SAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYASYPQQVDGVQDLATVAGAVP 374

Query: 195  PVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKTSSVSLQ 55
             VEQ EE  D L TPDVD LN AYL+ H SAILG PLW  TSS+  Q
Sbjct: 375  SVEQGEEWNDTLDTPDVDCLNDAYLSKHESAILGWPLWLTTSSLVRQ 421


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