BLASTX nr result

ID: Atractylodes21_contig00019363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019363
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...   418   e-114
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...   398   e-108
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   397   e-108
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   395   e-107
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105

>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
            gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
            [Ricinus communis]
          Length = 332

 Score =  418 bits (1074), Expect = e-114
 Identities = 224/348 (64%), Positives = 259/348 (74%), Gaps = 1/348 (0%)
 Frame = +1

Query: 160  MSSGIHRTPKSSGRQSLFFNDLATPVTNRRSGSGKFTTPGQAAAVSALWRENFATSDLPP 339
            MS+ ++RTPKSSG +SLF+ DLA+PV+ R+   GKF TPGQAAAVSALWRENF  SDLPP
Sbjct: 1    MSTLVNRTPKSSGSRSLFYQDLASPVSARK---GKFATPGQAAAVSALWRENFGGSDLPP 57

Query: 340  PPMFTLEDRSDLSPESGMQDYPVGSPEPNSNSRTPAQTPSKLFSTTPNKXXXXXXXXXXX 519
            PPM+TLEDRSD SPESG+ DYPV SPE  S+ R+P Q   + F   P+K           
Sbjct: 58   PPMYTLEDRSDFSPESGIPDYPV-SPEVKSDPRSPRQISGREFMI-PSKSKSDASTSFAL 115

Query: 520  XXAFLGNQQSPAIQTPLGTSSWWSAXXXXXXXXXXXXXXXXXPVDGIVHRQPGALIILPP 699
                  NQQ  A      +S+WWS                  PV+G+V  QPGALIILPP
Sbjct: 116  MNGHQ-NQQGSA------SSTWWSPAKASSSEQEDKGKGS--PVEGVV--QPGALIILPP 164

Query: 700  PREVARPEIQRNSLPVGTIDEEEWVTIYGFSPADTNLVLREFEKCGVILKHVPGPRDSNW 879
             REVARPE+QRN+LP G  DEEEWVT+YGFSP DTNLVLREFEKCGVILKHVPGPRD+NW
Sbjct: 165  LREVARPEMQRNNLPTGKFDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANW 224

Query: 880  MHILYQSRFDAQKALSKNGMQLNGALIIGVKPVDPMQRQALSDRLHNQGFMPLPPPTSTR 1059
            MHILYQSR DAQKALSKNGMQ+NG LI+GVKPVDPMQRQAL++RL+NQGFM LPPP+S+R
Sbjct: 225  MHILYQSRSDAQKALSKNGMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSR 284

Query: 1060 KSEAAVFKASARAYH-QNGSTVTSQSGGTMASPAKSVVSKIVDLMFGL 1200
             SE     AS+R YH QNGS+   QSGG++ASPAKSVVSKI D+MFG+
Sbjct: 285  SSELKTLGASSRPYHIQNGSSSARQSGGSIASPAKSVVSKIFDVMFGI 332


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
            gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score =  398 bits (1023), Expect = e-108
 Identities = 214/348 (61%), Positives = 255/348 (73%), Gaps = 1/348 (0%)
 Frame = +1

Query: 160  MSSGIHRTPKSSGRQSLFFNDLATPVTNRRSGSGKFTTPGQAAAVSALWRENFATSDLPP 339
            MS+ + RTP+SS RQSLFF DLA+PV+ RR   GKF++P QAAAVS+LWRENF +SDLPP
Sbjct: 1    MSTTVQRTPRSS-RQSLFFQDLASPVSARR---GKFSSPSQAAAVSSLWRENFGSSDLPP 56

Query: 340  PPMFTLEDRSDLSPESGMQDYPVGSPEPNSNSRTPAQTPSKLFSTTPNKXXXXXXXXXXX 519
            PP+FTLEDRSD SPESG+ DY + SPE  S++RTP QT +K FST P K           
Sbjct: 57   PPVFTLEDRSDFSPESGILDYQI-SPETKSDTRTPIQTSNKEFST-PVKSKSEASTSYAL 114

Query: 520  XXAFLGNQQSPAIQTPLGTSSWWSAXXXXXXXXXXXXXXXXXPVDGIVHRQPGALIILPP 699
                   Q SP +       SWWS                  PV+G+V  QPGALI LPP
Sbjct: 115  RGVQQNQQGSPGL-------SWWSPTTAKSGGEQDERGRSS-PVEGVV--QPGALITLPP 164

Query: 700  PREVARPEIQRNSLPVGTIDEEEWVTIYGFSPADTNLVLREFEKCGVILKHVPGPRDSNW 879
            P EVARPE+QRNSLP G ++EEEWVT+YGFSP DTN+VLREFEKCG ILKHVPGPRD+NW
Sbjct: 165  PLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANW 224

Query: 880  MHILYQSRFDAQKALSKNGMQLNGALIIGVKPVDPMQRQALSDRLHNQGFMPLPPPTSTR 1059
            MHILYQ+R DA KAL+KNGMQ+NG LI+GVK +DPMQRQAL++RL NQGFMPLP P S R
Sbjct: 225  MHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLP-SAR 283

Query: 1060 KSEAAVFKASARAYH-QNGSTVTSQSGGTMASPAKSVVSKIVDLMFGL 1200
             SE +  KA +R Y+ QNG++   Q+GGT+ASP KS+VSKI+DLMFG+
Sbjct: 284  NSEVSSLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331


>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
            gi|297743215|emb|CBI36082.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  397 bits (1020), Expect = e-108
 Identities = 217/348 (62%), Positives = 253/348 (72%), Gaps = 1/348 (0%)
 Frame = +1

Query: 160  MSSGIHRTPKSSGRQSLFFNDLATPVTNRRSGSGKFTTPGQAAAVSALWRENFATSDLPP 339
            MS+ + RTP+S GRQSLFF DLA+PV++RR   GKFT+ GQAAAVSALW +NFA SDLPP
Sbjct: 1    MSTTVQRTPRS-GRQSLFFQDLASPVSSRR---GKFTSSGQAAAVSALWHDNFAGSDLPP 56

Query: 340  PPMFTLEDRSDLSPESGMQDYPVGSPEPNSNSRTPAQTPSKLFSTTPNKXXXXXXXXXXX 519
            PPM+TLEDRSD SPESG+ DYPV SPE  S+ RTP     + F  TP K           
Sbjct: 57   PPMYTLEDRSDFSPESGILDYPV-SPEIKSDLRTPVHGSGRDF-LTPVK----------- 103

Query: 520  XXAFLGNQQSPAIQTPLGTSSWWSAXXXXXXXXXXXXXXXXXPVDGIVHRQPGALIILPP 699
                 G  ++    T   + SWWS                  PV+G+V  QPGALI LPP
Sbjct: 104  -----GKSEA---STSSASLSWWSPAKSGGDQEEKGKGS---PVEGVV--QPGALITLPP 150

Query: 700  PREVARPEIQRNSLPVGTIDEEEWVTIYGFSPADTNLVLREFEKCGVILKHVPGPRDSNW 879
            PREVARPE+QRN LP G +DEEEWVT+YGFSP DTNLVLREFEKCGVILKHVPGPRD+NW
Sbjct: 151  PREVARPEMQRNCLPAGNLDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANW 210

Query: 880  MHILYQSRFDAQKALSKNGMQLNGALIIGVKPVDPMQRQALSDRLHNQGFMPLPPPTSTR 1059
            +HILYQ+R DAQKALSKNGMQ+NG LI+GVKP+DPMQRQAL++RL+NQGFM LPPP S+R
Sbjct: 211  IHILYQNRSDAQKALSKNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSR 270

Query: 1060 KSEAAVFKASARAYH-QNGSTVTSQSGGTMASPAKSVVSKIVDLMFGL 1200
              E+   + S R Y+ QNGS    QS G +ASPAKSVVSKI+DLMFG+
Sbjct: 271  SLESNPLRVSPRPYYLQNGSN-ARQSSGAIASPAKSVVSKIMDLMFGV 317


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  395 bits (1015), Expect = e-107
 Identities = 212/348 (60%), Positives = 254/348 (72%), Gaps = 1/348 (0%)
 Frame = +1

Query: 160  MSSGIHRTPKSSGRQSLFFNDLATPVTNRRSGSGKFTTPGQAAAVSALWRENFATSDLPP 339
            MS+ + RTP+SS R SLFF DLA+PV+ RR   GKF++PGQAAAVS+LWRENF +SDLPP
Sbjct: 1    MSTTVQRTPRSS-RHSLFFQDLASPVSARR---GKFSSPGQAAAVSSLWRENFGSSDLPP 56

Query: 340  PPMFTLEDRSDLSPESGMQDYPVGSPEPNSNSRTPAQTPSKLFSTTPNKXXXXXXXXXXX 519
            PP+FTLEDRSD SPESG+ DY + SPE  S++RTP QT +K FST P K           
Sbjct: 57   PPVFTLEDRSDFSPESGILDYQI-SPEAKSDTRTPIQTSNKEFST-PLKSKSEASTSYAL 114

Query: 520  XXAFLGNQQSPAIQTPLGTSSWWSAXXXXXXXXXXXXXXXXXPVDGIVHRQPGALIILPP 699
                   Q SP +       SWWS                  PV+G+V  QPGALI LPP
Sbjct: 115  RGVQQNQQGSPGL-------SWWSPTTAKSVGEQDEKGRSS-PVEGVV--QPGALITLPP 164

Query: 700  PREVARPEIQRNSLPVGTIDEEEWVTIYGFSPADTNLVLREFEKCGVILKHVPGPRDSNW 879
            P EVARPE+QRNSLP G ++EEEWVT+YGFSP DTN+VLREFEKCG ILKHVPGPRD+NW
Sbjct: 165  PLEVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANW 224

Query: 880  MHILYQSRFDAQKALSKNGMQLNGALIIGVKPVDPMQRQALSDRLHNQGFMPLPPPTSTR 1059
            +HILYQ+R DA KAL+KNGMQ+NG LI+GVK +DPMQRQAL++RL NQGFMPL P  S R
Sbjct: 225  VHILYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPL-PLASAR 283

Query: 1060 KSEAAVFKASARAYH-QNGSTVTSQSGGTMASPAKSVVSKIVDLMFGL 1200
             SE +  KA +R Y+ QNG++   Q+GGT+ASP KS+VSKI+DLMFG+
Sbjct: 284  NSEVSTLKAPSRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331


>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  388 bits (997), Expect = e-105
 Identities = 208/340 (61%), Positives = 246/340 (72%), Gaps = 2/340 (0%)
 Frame = +1

Query: 187  KSSGRQSLFFNDLATPVTNRRSGSGKFTTPGQAAAVSALWRENFATSDLPPPPMFTLEDR 366
            KSSGRQSLFF DLA+PV+   +G GKF+TP QAAAVSALWR+NF  SDLPPPP +TLEDR
Sbjct: 6    KSSGRQSLFFQDLASPVS---AGKGKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLEDR 62

Query: 367  SDLSPESGMQDYPVGSPEPNSNSRT-PAQTPSKLFSTTPNKXXXXXXXXXXXXXAFLGNQ 543
            S++SPESG+ DYP+ SP+  S+  T P Q+  + F T P               A +  Q
Sbjct: 63   SEISPESGIPDYPL-SPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSF-----ALISGQ 116

Query: 544  QSPAIQTPLGTSSWWSAXXXXXXXXXXXXXXXXXPVDGIVHRQPGALIILPPPREVARPE 723
             +   Q     S+WWS                  PV+G+V  QPGALI LPPPREVARPE
Sbjct: 117  NT---QQGSPISTWWSPSKARSSEHEDKGKGS--PVEGVV--QPGALITLPPPREVARPE 169

Query: 724  IQRNSLPVGTIDEEEWVTIYGFSPADTNLVLREFEKCGVILKHVPGPRDSNWMHILYQSR 903
              RN +P G +DEEEWVT+YGF+P DTNLVLREFEKCGVILKHVPGPR++NWMHILYQSR
Sbjct: 170  KHRNCVPAGNLDEEEWVTVYGFAPGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSR 229

Query: 904  FDAQKALSKNGMQLNGALIIGVKPVDPMQRQALSDRLHNQGFMPLPPPTSTRKSEAAVFK 1083
             DAQKALSKNGMQ+NG LIIGVK VDPMQRQAL++R++NQGFM LPPP+STR  ++   +
Sbjct: 230  ADAQKALSKNGMQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPDSNALR 289

Query: 1084 ASARA-YHQNGSTVTSQSGGTMASPAKSVVSKIVDLMFGL 1200
            AS R  Y QNGST   QSGG +ASPAKS+VSKI D+MFG+
Sbjct: 290  ASPRPHYLQNGSTSARQSGGVIASPAKSMVSKIFDVMFGI 329


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