BLASTX nr result

ID: Atractylodes21_contig00019325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019325
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95254.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   9e-20
ref|XP_003570724.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    88   3e-19
ref|XP_002884730.1| RNA helicase [Arabidopsis lyrata subsp. lyra...    87   3e-18
ref|NP_001043673.1| Os01g0639100 [Oryza sativa Japonica Group] g...    95   2e-17
gb|EAY75113.1| hypothetical protein OsI_03008 [Oryza sativa Indi...    95   2e-17

>dbj|BAJ95254.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 412

 Score = 92.4 bits (228), Expect(2) = 9e-20
 Identities = 42/62 (67%), Positives = 54/62 (87%)
 Frame = -3

Query: 189 EAIDDFISKPTHACIGGKSVGDVEEIRKIENGVHIVFGTPGRICDMIKRRTLQTRAIKLL 10
           +A+  F+S   HAC+GGKS+G  E+IRK+E+GVH+V GTPGR+CDMIKRRTL+TRAIKLL
Sbjct: 128 QAVGSFMSVSVHACVGGKSIG--EDIRKLESGVHVVSGTPGRVCDMIKRRTLRTRAIKLL 185

Query: 9   IL 4
           +L
Sbjct: 186 VL 187



 Score = 30.8 bits (68), Expect(2) = 9e-20
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -1

Query: 236 QALILSPTRELASQIEKL 183
           QALILSPTRELA+Q E++
Sbjct: 109 QALILSPTRELATQTERV 126


>ref|XP_003570724.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 34-like
           [Brachypodium distachyon]
          Length = 410

 Score = 88.2 bits (217), Expect(2) = 3e-19
 Identities = 40/62 (64%), Positives = 54/62 (87%)
 Frame = -3

Query: 189 EAIDDFISKPTHACIGGKSVGDVEEIRKIENGVHIVFGTPGRICDMIKRRTLQTRAIKLL 10
           +A+ +++S   HAC+GGKS+G  E+IRK+E+GV +V GTPGR+CDMIKRRTL+TRAIKLL
Sbjct: 126 QAVGNYMSVNVHACVGGKSIG--EDIRKLESGVQVVSGTPGRVCDMIKRRTLRTRAIKLL 183

Query: 9   IL 4
           +L
Sbjct: 184 VL 185



 Score = 33.1 bits (74), Expect(2) = 3e-19
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -1

Query: 254 SSCDRAQALILSPTRELASQIEKL 183
           +S    QALILSPTRELA+Q EK+
Sbjct: 101 TSVHEVQALILSPTRELATQTEKV 124


>ref|XP_002884730.1| RNA helicase [Arabidopsis lyrata subsp. lyrata]
           gi|297330570|gb|EFH60989.1| RNA helicase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score = 86.7 bits (213), Expect(2) = 3e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = -3

Query: 189 EAIDDFISKPTHACIGGKSVGDVEEIRKIENGVHIVFGTPGRICDMIKRRTLQTRAIKLL 10
           +AI    +   HACIGGKSVG  E+IRK+E+GVH+V GTPGR+CDMIKRR+L+TRAIKLL
Sbjct: 124 QAIGSHGNVQAHACIGGKSVG--EDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLL 181

Query: 9   IL 4
           IL
Sbjct: 182 IL 183



 Score = 31.6 bits (70), Expect(2) = 3e-18
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -1

Query: 254 SSCDRAQALILSPTRELASQIE 189
           +S    QALILSPTRELASQ E
Sbjct: 99  TSSREVQALILSPTRELASQTE 120


>ref|NP_001043673.1| Os01g0639100 [Oryza sativa Japonica Group]
           gi|75321708|sp|Q5VNM3.1|RH2_ORYSJ RecName: Full=DEAD-box
           ATP-dependent RNA helicase 2 gi|55297015|dbj|BAD68586.1|
           putative nicotiana eukaryotic translation initiation
           factor 4A [Oryza sativa Japonica Group]
           gi|55297606|dbj|BAD68952.1| putative nicotiana
           eukaryotic translation initiation factor 4A [Oryza
           sativa Japonica Group] gi|113533204|dbj|BAF05587.1|
           Os01g0639100 [Oryza sativa Japonica Group]
           gi|215707106|dbj|BAG93566.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618929|gb|EEE55061.1| hypothetical protein
           OsJ_02769 [Oryza sativa Japonica Group]
          Length = 404

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = -3

Query: 186 AIDDFISKPTHACIGGKSVGDVEEIRKIENGVHIVFGTPGRICDMIKRRTLQTRAIKLLI 7
           AI DFI+   HACIGGKS+G  E+IRK+E+GVH+V GTPGR+CDMIKRRTL+TRAIKLLI
Sbjct: 121 AIGDFINIQVHACIGGKSIG--EDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLI 178

Query: 6   L 4
           L
Sbjct: 179 L 179


>gb|EAY75113.1| hypothetical protein OsI_03008 [Oryza sativa Indica Group]
          Length = 359

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = -3

Query: 186 AIDDFISKPTHACIGGKSVGDVEEIRKIENGVHIVFGTPGRICDMIKRRTLQTRAIKLLI 7
           AI DFI+   HACIGGKS+G  E+IRK+E+GVH+V GTPGR+CDMIKRRTL+TRAIKLLI
Sbjct: 86  AIGDFINIQVHACIGGKSIG--EDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLI 143

Query: 6   L 4
           L
Sbjct: 144 L 144


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