BLASTX nr result

ID: Atractylodes21_contig00019243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019243
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]   162   3e-38
ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...   161   4e-38
ref|XP_002326520.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002868035.1| hypothetical protein ARALYDRAFT_493093 [Arab...   152   4e-35
ref|NP_193515.1| putative AT-hook DNA-binding family protein [Ar...   152   4e-35

>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score =  162 bits (409), Expect = 3e-38
 Identities = 89/152 (58%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   MAGLDLGTASRYIXXXXXXXXXXXXXXXPD-NHQLFSDAALHNXXXXXXXXXXXXXMVSP 178
           MAGLDLGTASRYI                D ++      A ++             +VS 
Sbjct: 1   MAGLDLGTASRYIHQLHRSDLHLQRPQDSDEDNNTNRGGAQYSGDHQDDVAHHGLELVSA 60

Query: 179 NXXXXXXXXXXXXDIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFD 358
           N            D+V RRPRGRP GSKNKPKPPVIITRESANTLRAHILE+GNGCDVFD
Sbjct: 61  NAGPG--------DLVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFD 112

Query: 359 CIATYARRRQRGICILSGSGIVTNVSLRQPAA 454
           C+ATYARRRQRGIC+LSGSG VTNVS+RQPAA
Sbjct: 113 CVATYARRRQRGICVLSGSGTVTNVSIRQPAA 144


>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score =  161 bits (408), Expect = 4e-38
 Identities = 89/152 (58%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   MAGLDLGTASRYIXXXXXXXXXXXXXXXPD-NHQLFSDAALHNXXXXXXXXXXXXXMVSP 178
           MAGLDLGTASRYI                D ++      A ++             +VS 
Sbjct: 1   MAGLDLGTASRYIHQLHRSDLHLQRPQDSDEDNNTNRGGAQYSGDHQDDVAHHGLELVSA 60

Query: 179 NXXXXXXXXXXXXDIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFD 358
           N            DIV RRPRGRP GSKN+PKPPVIITRESANTLRAHILE+GNGCDVFD
Sbjct: 61  NAGPG--------DIVARRPRGRPPGSKNRPKPPVIITRESANTLRAHILEVGNGCDVFD 112

Query: 359 CIATYARRRQRGICILSGSGIVTNVSLRQPAA 454
           C+ATYARRRQRGIC+LSGSG VTNVS+RQPAA
Sbjct: 113 CVATYARRRQRGICVLSGSGTVTNVSIRQPAA 144


>ref|XP_002326520.1| predicted protein [Populus trichocarpa] gi|222833842|gb|EEE72319.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/79 (89%), Positives = 77/79 (97%)
 Frame = +2

Query: 218 DIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFDCIATYARRRQRGI 397
           D+VGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILE+GNGCDVF+C+A YARRRQRGI
Sbjct: 77  DLVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFECVANYARRRQRGI 136

Query: 398 CILSGSGIVTNVSLRQPAA 454
           CILSG+G VTNVS+RQPAA
Sbjct: 137 CILSGAGTVTNVSIRQPAA 155


>ref|XP_002868035.1| hypothetical protein ARALYDRAFT_493093 [Arabidopsis lyrata subsp.
           lyrata] gi|297313871|gb|EFH44294.1| hypothetical protein
           ARALYDRAFT_493093 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +2

Query: 218 DIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFDCIATYARRRQRGI 397
           D+VGRRPRGRP GSKNKPKPPVIITRESANTLRAHILE+ NGCDVFDC+ATYARRRQRGI
Sbjct: 80  DVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGI 139

Query: 398 CILSGSGIVTNVSLRQPAA 454
           C+LSGSG VTNVS+RQP+A
Sbjct: 140 CVLSGSGTVTNVSIRQPSA 158


>ref|NP_193515.1| putative AT-hook DNA-binding family protein [Arabidopsis thaliana]
           gi|17933299|gb|AAL48232.1|AF446359_1 AT4g17800/dl4935c
           [Arabidopsis thaliana] gi|2245139|emb|CAB10560.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7268533|emb|CAB78783.1| hypothetical protein
           [Arabidopsis thaliana] gi|20453387|gb|AAM19932.1|
           AT4g17800/dl4935c [Arabidopsis thaliana]
           gi|119657390|tpd|FAA00294.1| TPA: AT-hook motif nuclear
           localized protein 23 [Arabidopsis thaliana]
           gi|332658552|gb|AEE83952.1| putative AT-hook DNA-binding
           family protein [Arabidopsis thaliana]
          Length = 292

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +2

Query: 218 DIVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFDCIATYARRRQRGI 397
           D+VGRRPRGRP GSKNKPKPPVIITRESANTLRAHILE+ NGCDVFDC+ATYARRRQRGI
Sbjct: 78  DVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGI 137

Query: 398 CILSGSGIVTNVSLRQPAA 454
           C+LSGSG VTNVS+RQP+A
Sbjct: 138 CVLSGSGTVTNVSIRQPSA 156


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