BLASTX nr result
ID: Atractylodes21_contig00019219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00019219
(1379 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ... 291 3e-76
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera] 291 3e-76
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus... 280 5e-73
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ... 273 6e-71
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana... 273 8e-71
>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
gi|296090242|emb|CBI40061.3| unnamed protein product
[Vitis vinifera]
Length = 258
Score = 291 bits (745), Expect = 3e-76
Identities = 176/293 (60%), Positives = 204/293 (69%), Gaps = 1/293 (0%)
Frame = +2
Query: 59 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTARDPRPGLPSSPAIGFLFESRRC 238
MAIS++RA S R+I LL R +SH SP P +S A+ FL ESRR
Sbjct: 1 MAISVRRAF-SYRSI--LLLHCRHLSHIIHSP---NLTGSPSLNPSASSALDFLRESRRG 54
Query: 239 FAKPRKKWDDDDNGEIGVANGDAASRIEIV-NIGPIIKSTAISEMEAAIDAVSHELSKLR 415
FAK RK D D A + +E+V +IGP +K A+S+M+AA+ A+S ELSKLR
Sbjct: 55 FAKGRKSKDSD-----------AGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLR 103
Query: 416 TGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSPLG 595
TGRASAGMLDHIIV TGGVKMPL+R+AVVSVLDPKTLSVTPY+ +ALK+LE AIVSSPLG
Sbjct: 104 TGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLG 163
Query: 596 LNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXXXX 775
LNPK DGERLI IPP+TKEH+QA+CKVV+KS EDVKQ IRRARQKALD IKK+
Sbjct: 164 LNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKA------ 217
Query: 776 XXXXXXXXXXXXAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEI 934
S D AKRLEKEV+ELTKKF KSAED+CKAKEKEI
Sbjct: 218 ---------------GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255
>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
Length = 258
Score = 291 bits (745), Expect = 3e-76
Identities = 176/293 (60%), Positives = 204/293 (69%), Gaps = 1/293 (0%)
Frame = +2
Query: 59 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTARDPRPGLPSSPAIGFLFESRRC 238
MAIS++RA S R+I LL R +SH SP P +S A+ FL ESRR
Sbjct: 1 MAISVRRAF-SYRSI--LLLHCRHLSHIIHSP---NLTGSPSLNPSASSALDFLRESRRG 54
Query: 239 FAKPRKKWDDDDNGEIGVANGDAASRIEIV-NIGPIIKSTAISEMEAAIDAVSHELSKLR 415
FAK RK D D A + +E+V +IGP +K A+S+M+AA+ A+S ELSKLR
Sbjct: 55 FAKGRKSKDSD-----------AGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLR 103
Query: 416 TGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSPLG 595
TGRASAGMLDHIIV TGGVKMPL+R+AVVSVLDPKTLSVTPY+ +ALK+LE AIVSSPLG
Sbjct: 104 TGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLG 163
Query: 596 LNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXXXX 775
LNPK DGERLI IPP+TKEH+QA+CKVV+KS EDVKQ IRRARQKALD IKK+
Sbjct: 164 LNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKA------ 217
Query: 776 XXXXXXXXXXXXAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEI 934
S D AKRLEKEV+ELTKKF KSAED+CKAKEKEI
Sbjct: 218 ---------------GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255
>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
gi|223549449|gb|EEF50937.1| ribosome recycling factor,
putative [Ricinus communis]
Length = 262
Score = 280 bits (717), Expect = 5e-73
Identities = 163/296 (55%), Positives = 199/296 (67%), Gaps = 3/296 (1%)
Frame = +2
Query: 59 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTAR---DPRPGLPSSPAIGFLFES 229
MA+ ++RA+ S ++ LLR S++ +S +Q + + P FL +S
Sbjct: 1 MAVYLRRAMASKNSMTTLLR-----SYYSSSNNMIQGRNVFCNCKAQSNFIPRCNFLIDS 55
Query: 230 RRCFAKPRKKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSHELSK 409
RR FAK +K DD G + V +IGP +K +A +MEAAI ++S EL+K
Sbjct: 56 RRGFAKGKKSKDDSGGGTVQVTP----------DIGPAVKESAALQMEAAIVSLSRELTK 105
Query: 410 LRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSP 589
LRTGRASAGMLDHIIV T GVKMPLNR+AVV+V+DPKTLSV PY+PN + LEKAIVSSP
Sbjct: 106 LRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSP 165
Query: 590 LGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXX 769
LGLNP+ DGERLI +IPP+TKEHMQA+CKVV KS E+VKQ +RRARQKALD+IKK+
Sbjct: 166 LGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTIKKA---- 221
Query: 770 XXXXXXXXXXXXXXAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 937
S S DD KRLEKEV+ELTKKF KSAEDICKAKEKEIT
Sbjct: 222 -----------------GSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEIT 260
>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
Length = 267
Score = 273 bits (699), Expect = 6e-71
Identities = 165/302 (54%), Positives = 208/302 (68%), Gaps = 6/302 (1%)
Frame = +2
Query: 56 LMAISIKRAIISCRNIHPLLR-----ISRRISHFPASP-YSLQTARDPRPGLPSSPAIGF 217
+MA+ ++RA+ S RN +LR + R F +SP + RD + L S P F
Sbjct: 1 MMAMFVRRAL-SSRNAIGVLRRSSVVVQSRDFSFISSPNLMMMGGRDLQFDL-SMP--DF 56
Query: 218 LFESRRCFAKPRKKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSH 397
L +SRR FAK +K DD G + DAA +IGP +K+ A S+MEAAIDA+S
Sbjct: 57 LRDSRRGFAKGKKSKDDSGTGMV-----DAAP-----DIGPTVKAAASSQMEAAIDALSR 106
Query: 398 ELSKLRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAI 577
+L+KLRTGRA+ GMLDHI+V TGGVKMPLN +A+VSVLDPKTLSV PY+P+ +KELEKAI
Sbjct: 107 DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166
Query: 578 VSSPLGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKS 757
V+SPLGLNPK DG+RL+ +IP +TKEH+QA+CK+V+KSSE VKQ IRRARQKALD+IKK+
Sbjct: 167 VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226
Query: 758 LPXXXXXXXXXXXXXXXXAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 937
S D+ KRLEKEV+ELTKKF KSAED+CK+KEKEIT
Sbjct: 227 ---------------------GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265
Query: 938 SS 943
+
Sbjct: 266 EA 267
>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
recycling factor [Arabidopsis thaliana]
gi|62319213|dbj|BAD94407.1| putative ribosome recycling
factor [Arabidopsis thaliana]
gi|332640195|gb|AEE73716.1| ribosome recycling factor
[Arabidopsis thaliana]
Length = 267
Score = 273 bits (698), Expect = 8e-71
Identities = 165/302 (54%), Positives = 207/302 (68%), Gaps = 6/302 (1%)
Frame = +2
Query: 56 LMAISIKRAIISCRNIHPLLR-----ISRRISHFPASP-YSLQTARDPRPGLPSSPAIGF 217
+MA+ ++RA+ S RN LR + R F +SP + RD + L S P F
Sbjct: 1 MMAMFVRRAL-SSRNAIGFLRRSSVVVQSRDFSFISSPNLMMMGGRDLQFDL-SMP--DF 56
Query: 218 LFESRRCFAKPRKKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSH 397
L +SRR FAK +K DD G + DAA +IGP +K+ A S+MEAAIDA+S
Sbjct: 57 LRDSRRGFAKGKKSKDDSGTGMV-----DAAP-----DIGPTVKAAASSQMEAAIDALSR 106
Query: 398 ELSKLRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAI 577
+L+KLRTGRA+ GMLDHI+V TGGVKMPLN +A+VSVLDPKTLSV PY+P+ +KELEKAI
Sbjct: 107 DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166
Query: 578 VSSPLGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKS 757
V+SPLGLNPK DG+RL+ +IP +TKEH+QA+CK+V+KSSE VKQ IRRARQKALD+IKK+
Sbjct: 167 VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226
Query: 758 LPXXXXXXXXXXXXXXXXAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 937
S D+ KRLEKEV+ELTKKF KSAED+CK+KEKEIT
Sbjct: 227 ---------------------GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265
Query: 938 SS 943
+
Sbjct: 266 EA 267