BLASTX nr result

ID: Atractylodes21_contig00019194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019194
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CBI18517.3| unnamed protein product [Vitis vinifera]               91   1e-16
emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]    89   8e-16
ref|XP_002530558.1| conserved hypothetical protein [Ricinus comm...    81   2e-13
ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13

>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 72/229 (31%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
 Frame = +3

Query: 12   DASLQDICXXXXXXXXXXXXXIQAVRCLS----------------CKEYDFVVGIINCFK 143
            DASLQD               +QA+ C+S                CKEY++++GII  F 
Sbjct: 491  DASLQDTYLLASILKLISSSMLQAIWCISHSGNPGCLKTFKDLSSCKEYEYILGIIANFG 550

Query: 144  VFSIRLPIQKFAYNTMETRSTSHKEXXXXXXXXXXXXXXXXXXXXXXXVKSCISVIMALT 323
             ++I LPI KF  + M+  ST HK+                       VK C   +M + 
Sbjct: 551  RYNIHLPISKFLSHVMD-HSTRHKDSKMMLLHFSGMLSISLAIGVDFVVKGCTLAMMIIL 609

Query: 324  SLFILEEGNIDAMMSLAHHPTSQGSLVI----YKEALASQYPTLGVASKFHKIRTLYVSN 491
            +LFI EEGN+DA+  L        S  I     +  L  Q  +  VASKF K++TLY+S 
Sbjct: 610  NLFIFEEGNLDALRPLLVSKVESFSSGISSGNIQRVLVEQNSSQMVASKFQKVQTLYLST 669

Query: 492  ASVSTL-------TEEDVGAENLSIPFSMECV-------EETCRGEMYL 596
              + +         EE  G  N SI  +M+CV       EETC G+++L
Sbjct: 670  DLLPSSCSGNKDGQEEMSGNANASILNNMDCVVGIEEKTEETCNGKIFL 718


>emb|CBI18517.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 72/229 (31%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
 Frame = +3

Query: 12   DASLQDICXXXXXXXXXXXXXIQAVRCLS----------------CKEYDFVVGIINCFK 143
            DASLQD               +QA+ C+S                CKEY++++GII  F 
Sbjct: 414  DASLQDTYLLASILKLISSSMLQAIWCISHSGNPGCLKTFKDLSSCKEYEYILGIIANFG 473

Query: 144  VFSIRLPIQKFAYNTMETRSTSHKEXXXXXXXXXXXXXXXXXXXXXXXVKSCISVIMALT 323
             ++I LPI KF  + M+  ST HK+                       VK C   +M + 
Sbjct: 474  RYNIHLPISKFLSHVMD-HSTRHKDSKMMLLHFSGMLSISLAIGVDFVVKGCTLAMMIIL 532

Query: 324  SLFILEEGNIDAMMSLAHHPTSQGSLVI----YKEALASQYPTLGVASKFHKIRTLYVSN 491
            +LFI EEGN+DA+  L        S  I     +  L  Q  +  VASKF K++TLY+S 
Sbjct: 533  NLFIFEEGNLDALRPLLVSKVESFSSGISSGNIQRVLVEQNSSQMVASKFQKVQTLYLST 592

Query: 492  ASVSTL-------TEEDVGAENLSIPFSMECV-------EETCRGEMYL 596
              + +         EE  G  N SI  +M+CV       EETC G+++L
Sbjct: 593  DLLPSSCSGNKDGQEEMSGNANASILNNMDCVVGIEEKTEETCNGKIFL 641


>emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]
          Length = 741

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 71/229 (31%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
 Frame = +3

Query: 12   DASLQDICXXXXXXXXXXXXXIQAVRCLS----------------CKEYDFVVGIINCFK 143
            DASLQD               +QA+ C+S                CKEY++++GII  F 
Sbjct: 489  DASLQDTYLLASILKLISSSMLQAIWCISHSGNPGCLKTFKDLSSCKEYEYILGIIANFG 548

Query: 144  VFSIRLPIQKFAYNTMETRSTSHKEXXXXXXXXXXXXXXXXXXXXXXXVKSCISVIMALT 323
             ++I LPI K   + M+  ST HK+                       VK C   +M + 
Sbjct: 549  RYNIHLPISKXLSHVMD-HSTRHKDSKMMLLHFSGMLSISLAIGVDFVVKGCTLAMMIIL 607

Query: 324  SLFILEEGNIDAMMSLAHHPTSQGSLVI----YKEALASQYPTLGVASKFHKIRTLYVSN 491
            +LFI EEGN+DA+  L        S  I     +  L  Q  +  VASKF K++TLY+S 
Sbjct: 608  NLFIFEEGNLDALRPLLVSKVESFSSGISSGNIQRVLVEQNSSQMVASKFQKVQTLYLST 667

Query: 492  ASVSTL-------TEEDVGAENLSIPFSMECV-------EETCRGEMYL 596
              + +         EE  G  N SI  +M+CV       EETC G+++L
Sbjct: 668  DLLPSSCSGNKDGQEEMSGNANASILNNMDCVVGIEEKTEETCNGKIFL 716


>ref|XP_002530558.1| conserved hypothetical protein [Ricinus communis]
            gi|223529896|gb|EEF31826.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 776

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
 Frame = +3

Query: 96   SCKEYDFVVGIINCFKVFSIRLPIQKFAYNTMETRSTSHKEXXXXXXXXXXXXXXXXXXX 275
            S KEY+++V I+ CF+ FSI LPIQ F    M++ S  HK+                   
Sbjct: 533  SSKEYNYLVHILGCFQQFSIHLPIQNFLNEMMQSHSARHKDSKWMLLHLSGLLSLSYASG 592

Query: 276  XXXXVKSCISVIMALTSLFILEEGNIDAMMSLAHHPT---SQGSLVIYKEALASQYPTLG 446
                VK C+  +M L +LFI+EEG++ A+ SL    +   S  S    +E +  +  T  
Sbjct: 593  IDFLVKGCLFTMMMLLNLFIIEEGDLSALRSLRGSRSKSYSSKSPDNVEEVMVVRKSTEL 652

Query: 447  VASKFHKIRTLYVSNAS--VSTLTEEDVGAENLSIPFSMECV----------EETCRGEM 590
            ++SKF KI+  Y+   S  VS   ++D  AE       +  +          EE C GEM
Sbjct: 653  ISSKFQKIQDTYLRTRSHVVSDKRKQDNQAETSEYSCVLNGLDSAVTVASNTEEICNGEM 712

Query: 591  YLK 599
            +LK
Sbjct: 713  FLK 715


>ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|222848970|gb|EEE86517.1|
            predicted protein [Populus trichocarpa]
          Length = 751

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 23/191 (12%)
 Frame = +3

Query: 96   SCKEYDFVVGIINCFKVFSIRLPIQKFAYNTMETRSTSHKEXXXXXXXXXXXXXXXXXXX 275
            SCK YD +V I+ CF+ FSI LPIQKF   T+++    HK+                   
Sbjct: 508  SCKGYDVIVDILGCFEHFSISLPIQKFLCETLQSHPARHKKSRWMFFHFSGLLSLSYASG 567

Query: 276  XXXXVKSCISVIMALTSLFILEEGNIDAMMSL----------AHHPTSQGSLVIYKEALA 425
                VK C+  +M + ++FI+EEG++ A+ SL               S+G + I K +  
Sbjct: 568  LDFLVKDCLFALMVVLNMFIIEEGDLAAVDSLFGSSLESFSSKSSDKSEGVMAISKSSQI 627

Query: 426  SQYPTLGVASKFHKIRTLYVSNASVSTLTEEDVGAEN-------------LSIPFSMECV 566
                   V+SK  KI+ +Y+     ST+   D    N             L    SME  
Sbjct: 628  -------VSSKIQKIQEMYLRTR--STICSNDRKQHNQAGTSEYGSIMNELDSVASMEDA 678

Query: 567  EETCRGEMYLK 599
            +ETC GE++LK
Sbjct: 679  KETCNGEIFLK 689


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