BLASTX nr result

ID: Atractylodes21_contig00019126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019126
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                    69   1e-15
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]    61   5e-11
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]    60   2e-10
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]    58   1e-09
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    60   2e-09

>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score = 68.9 bits (167), Expect(2) = 1e-15
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +1

Query: 94   MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSDNSSFIK 243
            +VTLS+T  EYVAA  CACQSVWM+ +LN    +QCKC T+F DNSS IK
Sbjct: 1068 VVTLSTTEAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIK 1117



 Score = 40.8 bits (94), Expect(2) = 1e-15
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3    RGSNDVIKGHTD--IAGDLDGGRSTSEYVFMMNGDFIKYIS 119
            RG +D + G+TD   AGD+DG RSTS +VFM++G  + + S
Sbjct: 1023 RGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSS 1063


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score = 61.2 bits (147), Expect(2) = 5e-11
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +1

Query: 94  MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSDNSSFIK 243
           +V+LS+T  E++AAT+CACQ++W++ IL+     Q  C TVF DNSS IK
Sbjct: 189 IVSLSTTEAEFIAATSCACQAIWIRRILDKLSHTQSNCTTVFCDNSSTIK 238



 Score = 33.1 bits (74), Expect(2) = 5e-11
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   RGSNDVIKGHTD--IAGDLDGGRSTSEYVFMMNGDFIKYIS 119
           +G ND +   TD    GDL+  +STS YVFM++ + + + S
Sbjct: 144 KGGNDKLVAFTDSDYPGDLEDRKSTSGYVFMLSSEAVSWYS 184


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score = 59.7 bits (143), Expect(2) = 2e-10
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = +1

Query: 94   MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSDNSSFIK 243
            +VTL +T VE+VAAT CACQ++WMK +L      Q  C T+  DNSS IK
Sbjct: 1143 IVTLLTTKVEFVAATACACQAIWMKRVLKKLSHEQKGCTTIMCDNSSTIK 1192



 Score = 32.3 bits (72), Expect(2) = 2e-10
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +3

Query: 33   TDIAGDLDGGRSTSEYVFMMNGDFIKYIS 119
            +D AGD+D  +STS YVF+++   I ++S
Sbjct: 1110 SDYAGDIDDRKSTSGYVFLLSSGVISWLS 1138


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score = 57.8 bits (138), Expect(2) = 1e-09
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +1

Query: 94   MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSDNSSFIK 243
            +V+LS+T  E++AA +CACQ+VW+K +L    +NQ K  T+  DNSS IK
Sbjct: 907  VVSLSTTEAEFIAAASCACQAVWLKRVLGKLSQNQGKSTTIHCDNSSAIK 956



 Score = 31.6 bits (70), Expect(2) = 1e-09
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   RGSNDVIKGHTD--IAGDLDGGRSTSEYVFMMNGDFIKYIS 119
           +G +D +  +TD   AGDL+  +STS YVF+++   + + S
Sbjct: 862 KGGDDELAAYTDSDYAGDLEDKKSTSGYVFLLSSRAVSWSS 902


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = +1

Query: 94   MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSDNSSFIK 243
            +VTLS+T  E+VAA +CACQ VWM+ +L     +Q KC TV  DNSS IK
Sbjct: 921  VVTLSTTEAEFVAAASCACQGVWMRRVLEKLCHSQGKCTTVLCDNSSTIK 970



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 33  TDIAGDLDGGRSTSEYVFMMNGDFIKYIS 119
           +D AGD+D  +STS YVF+++   + + S
Sbjct: 888 SDYAGDVDDRKSTSGYVFLLSEGVVSWSS 916


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