BLASTX nr result

ID: Atractylodes21_contig00019081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019081
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
emb|CBI15328.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...    72   6e-11
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08

>ref|XP_002302931.1| predicted protein [Populus trichocarpa] gi|222844657|gb|EEE82204.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/46 (84%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
 Frame = -3

Query: 458 FMKKPTAVK-EKKRETLPEKMARKRRRLEKIRLSFVKKPKKAQRLA 324
           FMKKP AVK EKKRETLPEKMARKRRRL++IRLSFVKKPKK  R A
Sbjct: 470 FMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRA 515


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Vitis vinifera]
          Length = 516

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/44 (84%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = -3

Query: 458 FMKKPT-AVKEKKRETLPEKMARKRRRLEKIRLSFVKKPKKAQR 330
           F+KKPT A KEKKRETLPEKMARKRRRL KIRLSFVKKPK+ +R
Sbjct: 471 FVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRR 514


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/44 (84%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = -3

Query: 458 FMKKPT-AVKEKKRETLPEKMARKRRRLEKIRLSFVKKPKKAQR 330
           F+KKPT A KEKKRETLPEKMARKRRRL KIRLSFVKKPK+ +R
Sbjct: 487 FVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRR 530


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/44 (84%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = -3

Query: 458 FMKKPTAVK-EKKRETLPEKMARKRRRLEKIRLSFVKKPKKAQR 330
           +MKKP AVK EKKRETLPEKMARKRRRL++IRLSFVKKPKK  R
Sbjct: 523 YMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMR 566


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Cucumis sativus]
           gi|449477122|ref|XP_004154936.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Cucumis sativus]
          Length = 522

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -3

Query: 458 FMKKPTAVK-EKKRETLPEKMARKRRRLEKIRLSFVKKPKKAQRLAY 321
           ++KKP   K  KKRETLPEKMARKRRRL++IRLSFVKKP++  R A+
Sbjct: 476 YVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522


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