BLASTX nr result

ID: Atractylodes21_contig00019026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019026
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   204   5e-51
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   204   5e-51
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   181   4e-44
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   176   1e-42

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score =  204 bits (520), Expect = 5e-51
 Identities = 105/146 (71%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
 Frame = +2

Query: 56  ERQALVDENFPLFSP-KPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPNLTFADLGL 232
           + + LVDENFPLFS  KPT   SK  +TT A NP  +  Q +  T++ ++P+ TFADLGL
Sbjct: 2   DEETLVDENFPLFSKRKPTPKPSK-NSTTTAQNP--NPEQPLTRTTNPTSPSSTFADLGL 58

Query: 233 SDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPILHRLAEDPY 412
           ++WA+Q CKELGM++PTPVQ HCIPRIL+G+DVLGLAQTGSGKTAAFALPILHRLAEDP+
Sbjct: 59  AEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDPF 118

Query: 413 GVFCLVVTPTRELAYQLAEQFRALGS 490
           GVF LVVTPTRELAYQLAEQFRALGS
Sbjct: 119 GVFALVVTPTRELAYQLAEQFRALGS 144


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  204 bits (520), Expect = 5e-51
 Identities = 105/146 (71%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
 Frame = +2

Query: 56  ERQALVDENFPLFSP-KPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPNLTFADLGL 232
           + + LVDENFPLFS  KPT   SK  +TT A NP  +  Q +  T++ ++P+ TFADLGL
Sbjct: 105 DEETLVDENFPLFSKRKPTPKPSK-NSTTTAQNP--NPEQPLTRTTNPTSPSSTFADLGL 161

Query: 233 SDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPILHRLAEDPY 412
           ++WA+Q CKELGM++PTPVQ HCIPRIL+G+DVLGLAQTGSGKTAAFALPILHRLAEDP+
Sbjct: 162 AEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDPF 221

Query: 413 GVFCLVVTPTRELAYQLAEQFRALGS 490
           GVF LVVTPTRELAYQLAEQFRALGS
Sbjct: 222 GVFALVVTPTRELAYQLAEQFRALGS 247


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  182 bits (461), Expect = 3e-44
 Identities = 98/154 (63%), Positives = 108/154 (70%), Gaps = 9/154 (5%)
 Frame = +2

Query: 56  ERQALVDENFPLFSPKPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPN--------- 208
           E+  +VD NFPLFS  P     + T      NP  S         +SS P+         
Sbjct: 7   EKTHVVDSNFPLFSKTPKRPKLQKT-----QNPDESPEIPKLEKEASSNPSNPDSAAAKT 61

Query: 209 LTFADLGLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPIL 388
             F+DLGLS+WALQTCKELGMK PT VQ HCIP+ILSG DVLGLAQTGSGKTAAFALPIL
Sbjct: 62  TLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPIL 121

Query: 389 HRLAEDPYGVFCLVVTPTRELAYQLAEQFRALGS 490
           HRLAEDP+GVF LV+TPTRELAYQLAEQFRA GS
Sbjct: 122 HRLAEDPFGVFALVITPTRELAYQLAEQFRAFGS 155


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus]
          Length = 491

 Score =  181 bits (460), Expect = 4e-44
 Identities = 97/149 (65%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
 Frame = +2

Query: 56  ERQALVDENFPLFSPKPTHGSSKPTATTLADNPISSHH--QFVKHT--SSSSTPNLTFAD 223
           +++ +VD NFPLFS KP     KP+    A   ++     Q  K T  ++ ST N+TFAD
Sbjct: 2   DQEVIVDRNFPLFS-KPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFAD 60

Query: 224 LGLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPILHRLAE 403
           LGLS+W +QTCKEL MKKPT VQ HCIP+IL+G DVLG+AQTGSGKTAAFALPIL RL+E
Sbjct: 61  LGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSE 120

Query: 404 DPYGVFCLVVTPTRELAYQLAEQFRALGS 490
            P+GVF LVVTPTRELAYQLAEQFRALGS
Sbjct: 121 TPFGVFALVVTPTRELAYQLAEQFRALGS 149


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 502

 Score =  176 bits (447), Expect = 1e-42
 Identities = 94/157 (59%), Positives = 114/157 (72%), Gaps = 10/157 (6%)
 Frame = +2

Query: 50  MAERQALVDENFPLF-SPKPTHG---SSKPTATTLADNPISSHHQFVKHTSSSSTPNLT- 214
           M + +  V++NFPLF  P  TH    + KP       N   +  +  K     ST ++T 
Sbjct: 1   MEQEEIQVEKNFPLFFKPSKTHKPLQTIKPPKAPKTQNR-KNDLETPKIEKEKSTNSITM 59

Query: 215 -----FADLGLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFAL 379
                F++LGL++WA++TCKELGMK+PTPVQ HCIP+IL G+DVLGLAQTGSGKTA FAL
Sbjct: 60  DETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFAL 119

Query: 380 PILHRLAEDPYGVFCLVVTPTRELAYQLAEQFRALGS 490
           PILHRLAEDPYG+F LV+TPTRELAYQLAEQFRALGS
Sbjct: 120 PILHRLAEDPYGIFALVITPTRELAYQLAEQFRALGS 156


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