BLASTX nr result

ID: Atractylodes21_contig00018986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018986
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|2...   318   3e-84
ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   310   4e-82
ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   309   1e-81
ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycin...   308   2e-81

>ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|222873699|gb|EEF10830.1|
            predicted protein [Populus trichocarpa]
          Length = 227

 Score =  318 bits (814), Expect = 3e-84
 Identities = 150/230 (65%), Positives = 179/230 (77%), Gaps = 2/230 (0%)
 Frame = +2

Query: 383  MGAVCCCLR-DECEDYVNPNSSIYRNCICLRCFLQNFLYMYTSLFQRGEEHARLPSPSSI 559
            MG+VCCCL  D+ EDY+NP +S+YRNC+CL CF+QNFL++YTS+FQRG+ H+    PSSI
Sbjct: 1    MGSVCCCLHADDFEDYMNPENSVYRNCMCLGCFVQNFLHVYTSIFQRGQLHS---VPSSI 57

Query: 560  QGTXXXXXXXXXXXXXG-VYRSPPRPLPYDVDPRYIRLQRDGLVSRREKGSSRSQEEGEP 736
            QG                +Y+SPPRPLPYD DPR IR QRDGLVSRR+KGSS S EE EP
Sbjct: 58   QGAASLTSSSSLDNSLADMYQSPPRPLPYDADPRCIRFQRDGLVSRRDKGSSHSHEESEP 117

Query: 737  LRGSDSDTDTDPLCAGNKWNSSTCEDGTKGSQTKSSLKLSTPKETTGYAHIFSSSEDEDV 916
            LR SDSD D++    G+KWN S CEDG K  +++SSLKLS+ K T    H++SSSE+EDV
Sbjct: 118  LR-SDSDVDSESFSTGDKWNVSACEDGGKEQRSRSSLKLSSAKATVANGHVYSSSEEEDV 176

Query: 917  CPTCLEEYTTENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMAFDET 1066
            CPTCL+EYT ENPKI+TKC+HHFHLGCIYEWMERS+SCPVCGKVM FDET
Sbjct: 177  CPTCLDEYTQENPKIMTKCTHHFHLGCIYEWMERSDSCPVCGKVMVFDET 226


>ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|222873147|gb|EEF10278.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  314 bits (805), Expect = 3e-83
 Identities = 149/229 (65%), Positives = 179/229 (78%), Gaps = 1/229 (0%)
 Frame = +2

Query: 383  MGAVCCCLR-DECEDYVNPNSSIYRNCICLRCFLQNFLYMYTSLFQRGEEHARLPSPSSI 559
            MG+VCCCL  D+ EDY+NP +S YRNC+CL CF+QNFL++YTS+F+RG+ H+    PSSI
Sbjct: 1    MGSVCCCLHVDDFEDYMNPENSEYRNCLCLSCFVQNFLHVYTSIFRRGQVHS---VPSSI 57

Query: 560  QGTXXXXXXXXXXXXXGVYRSPPRPLPYDVDPRYIRLQRDGLVSRREKGSSRSQEEGEPL 739
            QG               +YRSPPRPLPYD DPR +RLQRDGLVSRREKGSS S EE EPL
Sbjct: 58   QGAASLTSSSLDNSLAEMYRSPPRPLPYDADPRCLRLQRDGLVSRREKGSSHSHEESEPL 117

Query: 740  RGSDSDTDTDPLCAGNKWNSSTCEDGTKGSQTKSSLKLSTPKETTGYAHIFSSSEDEDVC 919
            R SD+D D++    G+KWN+S CE G K   ++SSLKLS+ K T G  +++SSSE+EDVC
Sbjct: 118  R-SDNDADSESFRTGDKWNASACEGG-KEQHSRSSLKLSSAKATVGIGYVYSSSEEEDVC 175

Query: 920  PTCLEEYTTENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMAFDET 1066
            PTCL+EYT E+PKI+TKCSHHFHLGCIYEWMERS+SCPVCGKVM FDET
Sbjct: 176  PTCLDEYTPEDPKIMTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 224


>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  310 bits (795), Expect = 4e-82
 Identities = 152/230 (66%), Positives = 177/230 (76%), Gaps = 2/230 (0%)
 Frame = +2

Query: 383  MGAVCCCLR-DECEDYVNPNSSIYRNCICLRCFLQNFLYMYTSLFQRGEEHARLPSPSSI 559
            MGAVCCC   D+ EDY+NPNSS+YRNC+CL CF+QNFL +Y S+F+RGE HA    PSSI
Sbjct: 1    MGAVCCCFNVDDFEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHA---IPSSI 57

Query: 560  QGTXXXXXXXXXXXXXG-VYRSPPRPLPYDVDPRYIRLQRDGLVSRREKGSSRSQEEGEP 736
            QG                +YRSPPRPLPYD DPR+ R QR+GLVSRREKGSS   EE EP
Sbjct: 58   QGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEP 117

Query: 737  LRGSDSDTDTDPLCAGNKWNSSTCEDGTKGSQTKSSLKLSTPKETTGYAHIFSSSEDEDV 916
            LRG D D D++ L +G KWN  T EDG+K  ++KSS++LS+ K TTG   ++SSSE+EDV
Sbjct: 118  LRG-DVDADSESLNSGGKWND-TSEDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDV 175

Query: 917  CPTCLEEYTTENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMAFDET 1066
            CPTCLEEYT ENPKI+TKCSHHFHLGCIYEWMERS+SCPVCGKVM FDET
Sbjct: 176  CPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDET 225


>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
            gi|298204451|emb|CBI16931.3| unnamed protein product
            [Vitis vinifera]
          Length = 225

 Score =  309 bits (792), Expect = 1e-81
 Identities = 155/230 (67%), Positives = 178/230 (77%), Gaps = 2/230 (0%)
 Frame = +2

Query: 383  MGAVCCCLR-DECEDYVNPNSSIYRNCICLRCFLQNFLYMYTSLFQRGEEHARLPSPSSI 559
            MG+VCCCLR ++ +DYVNPNSSIYRNC+CL CF+QNFL +YTSLF+RGE ++    PSSI
Sbjct: 1    MGSVCCCLRVEDFDDYVNPNSSIYRNCMCLSCFVQNFLNVYTSLFRRGEVNS---IPSSI 57

Query: 560  QGTXXXXXXXXXXXXXG-VYRSPPRPLPYDVDPRYIRLQRDGLVSRREKGSSRSQEEGEP 736
            QG                +YRSPPRPLPYDVDPR  RLQRDGLVSRREKGSS S EE EP
Sbjct: 58   QGAASLSSTTSLDDSLSDMYRSPPRPLPYDVDPRNFRLQRDGLVSRREKGSSHSHEESEP 117

Query: 737  LRGSDSDTDTDPLCAGNKWNSSTCEDGTKGSQTKSSLKLSTPKETTGYAHIFSSSEDEDV 916
            LR SD+D D++ L   +KWN S  +DG+K  + +SS+K S  K T G   I+SSSEDEDV
Sbjct: 118  LR-SDTDGDSESLITRDKWNES--DDGSKEQRPRSSVKHSMAKTTMGLGFIYSSSEDEDV 174

Query: 917  CPTCLEEYTTENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMAFDET 1066
            CPTCLEEYT ENPKI+TKCSHHFHLGCIYEWMERSE+CPVCGKVM FDET
Sbjct: 175  CPTCLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCPVCGKVMMFDET 224


>ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycine max]
            gi|255647555|gb|ACU24241.1| unknown [Glycine max]
          Length = 229

 Score =  308 bits (789), Expect = 2e-81
 Identities = 147/230 (63%), Positives = 176/230 (76%), Gaps = 2/230 (0%)
 Frame = +2

Query: 383  MGAVCCCLR-DECEDYVNPNSSIYRNCICLRCFLQNFLYMYTSLFQRGEEHARLPSPSSI 559
            MG+VCCCL  D+ EDYVNPNS +YRNC+CL C +QN L +Y+S+F+RG+ H+    PSSI
Sbjct: 1    MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLSVYSSIFRRGDAHS---IPSSI 57

Query: 560  QGTXXXXXXXXXXXXXG-VYRSPPRPLPYDVDPRYIRLQRDGLVSRREKGSSRSQEEGEP 736
            QG                +YRSPPRPLPYD +PRY R QRDGLVSRREKGSS S EE EP
Sbjct: 58   QGAASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETEP 117

Query: 737  LRGSDSDTDTDPLCAGNKWNSSTCEDGTKGSQTKSSLKLSTPKETTGYAHIFSSSEDEDV 916
            LR SD+D D + L +G+KWN S CE G+K   +KSSL+L + K +TG   +++SSE+EDV
Sbjct: 118  LR-SDADLDPESLNSGDKWNESACEAGSKEYHSKSSLRLQSTKYSTGVGLVYASSEEEDV 176

Query: 917  CPTCLEEYTTENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMAFDET 1066
            CPTCLEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGKVM FDET
Sbjct: 177  CPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDET 226


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