BLASTX nr result

ID: Atractylodes21_contig00018944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018944
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   112   4e-38
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   114   4e-38
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   115   5e-38
ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation...   112   2e-37
ref|XP_002524226.1| Eukaryotic translation initiation factor 3 R...   110   6e-37

>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  112 bits (279), Expect(2) = 4e-38
 Identities = 54/86 (62%), Positives = 64/86 (74%)
 Frame = +1

Query: 49  QRPRWGELDDEDDENDFGYLLLPKQVIGPDEHGVKKVVEYKFNDDGNXXXXXXXXXXXXX 228
           ++ RWGELD EDD  D  +LL P+QVIGP+E+G+KKV+EYKFN+DGN             
Sbjct: 19  EKIRWGELD-EDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRKL 77

Query: 229 ANARISKRAVERRSWLKFGDAVHEDV 306
           A AR+SKRAVERRSW KFGDAVHEDV
Sbjct: 78  AKARLSKRAVERRSWAKFGDAVHEDV 103



 Score = 71.2 bits (173), Expect(2) = 4e-38
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = +3

Query: 372 AVHEDVGARLTMVSTEEIVLERPRAPGTKAEDTNASGDPLA 494
           AVHEDVG+RLTMVSTEEI+LERPRAPGTKAE+T  +GD LA
Sbjct: 98  AVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLA 138


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  114 bits (286), Expect(2) = 4e-38
 Identities = 59/99 (59%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
 Frame = +1

Query: 16  MAVD-LPG-NATVQRPRWGELDDEDDENDFGYLLLPKQVIGPDEHGVKKVVEYKFNDDGN 189
           MA+D  PG  +T  + RWGEL+ EDD  D  +LL P+QVIGPD++G+KKV+EYKFNDDGN
Sbjct: 1   MAIDNKPGWGSTQSKLRWGELE-EDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGN 59

Query: 190 XXXXXXXXXXXXXANARISKRAVERRSWLKFGDAVHEDV 306
                        A AR+SKRA+ERRSW KFGDAVHEDV
Sbjct: 60  KVKITTTTRIRKLAKARLSKRAIERRSWAKFGDAVHEDV 98



 Score = 68.6 bits (166), Expect(2) = 4e-38
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +3

Query: 372 AVHEDVGARLTMVSTEEIVLERPRAPGTKAEDTNASGDPLA 494
           AVHEDVG+RLTMVSTEEI+LERPRAPG+KAE++  +GD LA
Sbjct: 93  AVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLA 133


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  115 bits (287), Expect(2) = 5e-38
 Identities = 59/97 (60%), Positives = 70/97 (72%)
 Frame = +1

Query: 16  MAVDLPGNATVQRPRWGELDDEDDENDFGYLLLPKQVIGPDEHGVKKVVEYKFNDDGNXX 195
           M+VD+  +A   + RWGELD EDD  D  +LL PKQVIGPD++G+KKV+EYKFNDDGN  
Sbjct: 1   MSVDI--SAKPSKLRWGELD-EDDGEDLDFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKI 57

Query: 196 XXXXXXXXXXXANARISKRAVERRSWLKFGDAVHEDV 306
                      A AR+SKRAVERR+W KFGDAVHEDV
Sbjct: 58  KITTTTRVRKLAKARLSKRAVERRNWPKFGDAVHEDV 94



 Score = 67.8 bits (164), Expect(2) = 5e-38
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 372 AVHEDVGARLTMVSTEEIVLERPRAPGTKAEDTNASGDPLA 494
           AVHEDVG+RLTMVSTEEI+LERPRAPGTKA++   +GD LA
Sbjct: 89  AVHEDVGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNLA 129


>ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like [Cucumis sativus]
           gi|449507153|ref|XP_004162947.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit G-like [Cucumis
           sativus]
          Length = 289

 Score =  112 bits (279), Expect(2) = 2e-37
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = +1

Query: 40  ATVQRPRWGELDDEDDENDFGYLLLPKQVIGPDEHGVKKVVEYKFNDDGNXXXXXXXXXX 219
           A+  + RWGELDD+D + DF  LL PK++IGPDE+GVKKV+EY+FN+DGN          
Sbjct: 5   ASRSKLRWGELDDDDGDLDF--LLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTTRT 62

Query: 220 XXXANARISKRAVERRSWLKFGDAVHEDV 306
              ANAR+SK AVERRSW KFGDAVHEDV
Sbjct: 63  RKLANARLSKHAVERRSWAKFGDAVHEDV 91



 Score = 68.9 bits (167), Expect(2) = 2e-37
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 372 AVHEDVGARLTMVSTEEIVLERPRAPGTKAEDTNASGDPLA 494
           AVHEDVG+RLTMVSTEEI+LERPRAPG+K E+   +GDPLA
Sbjct: 86  AVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLA 126


>ref|XP_002524226.1| Eukaryotic translation initiation factor 3 RNA-binding subunit,
           putative [Ricinus communis] gi|223536503|gb|EEF38150.1|
           Eukaryotic translation initiation factor 3 RNA-binding
           subunit, putative [Ricinus communis]
          Length = 221

 Score =  110 bits (274), Expect(2) = 6e-37
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = +1

Query: 37  NATVQRP-RWGELDDEDDENDFGYLLLPKQVIGPDEHGVKKVVEYKFNDDGNXXXXXXXX 213
           +A  Q+P RWGELD EDD  D  +LL PKQVIGPD++G+K+V+EYKFNDDGN        
Sbjct: 2   SALNQKPLRWGELD-EDDGEDLDFLLPPKQVIGPDDNGIKRVIEYKFNDDGNKIKITTTT 60

Query: 214 XXXXXANARISKRAVERRSWLKFGDAVHEDV 306
                A AR+SK A+ERR+W KFGDAVHEDV
Sbjct: 61  RVRKLAKARLSKSAIERRNWPKFGDAVHEDV 91



 Score = 69.3 bits (168), Expect(2) = 6e-37
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +3

Query: 372 AVHEDVGARLTMVSTEEIVLERPRAPGTKAEDTNASGDPLA 494
           AVHEDVGARLTMVSTEEI+LERPRAPGTK E+T   GD LA
Sbjct: 86  AVHEDVGARLTMVSTEEILLERPRAPGTKMEETKLPGDNLA 126


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