BLASTX nr result

ID: Atractylodes21_contig00018914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018914
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95830.1| unknown [Populus trichocarpa]                          205   4e-51
ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   199   2e-49
ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   172   3e-41
gb|ABV25001.1| polygalacturonase 4 [Oncidium Gower Ramsey]            166   2e-39

>gb|ABK95830.1| unknown [Populus trichocarpa]
          Length = 516

 Score =  205 bits (521), Expect = 4e-51
 Identities = 105/179 (58%), Positives = 119/179 (66%), Gaps = 5/179 (2%)
 Frame = +1

Query: 28  IDMGDFSFRNLTFAIVIAILVWSSSIDTCNARRGKHWRHGRGTSSSLYKKKGKNQGA--- 198
           ++M   SFR LTF + IA LVWSSS  TC ARRGKHWR  RG S+SL KKKGKNQG    
Sbjct: 2   VNMSGLSFRCLTFMLFIAFLVWSSSFHTCIARRGKHWRESRGNSASLAKKKGKNQGNSRQ 61

Query: 199 --HQIIVEXXXXXXXXXXXQKHXXXXXXXXXXXXQKGSKFNVLDYGAKGDGNSDDTKAFQ 372
             H  + +                          +  + FNVLD+GAKG+G SDDTKAFQ
Sbjct: 62  KHHNGVSKPKPPPPKAPSLPPPPKDDAPAPSPPQKSSTTFNVLDFGAKGNGKSDDTKAFQ 121

Query: 373 AAWADVCKVEASTMIVPSGYQFLVGPISFSGPYCQRNILFQLDGTIIAPTNSKAWGKGL 549
           AAWA+ CKV ASTMIVP+ Y FLVGPISFSGPYCQ NI+FQLDGTIIAPTNS  WG+GL
Sbjct: 122 AAWAEACKVAASTMIVPAEYVFLVGPISFSGPYCQANIVFQLDGTIIAPTNSNVWGRGL 180


>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|297739064|emb|CBI28553.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  199 bits (506), Expect = 2e-49
 Identities = 102/173 (58%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
 Frame = +1

Query: 34  MGDFSFRNLTFAIVIAILVWSSSIDTCNARRGKHWRHGRGTSSSLYKKKGKNQGAHQIIV 213
           M   SFR L F ++ A LVWSSS  TC+ARRGKHWRH R  S+SL KKK K+ G+     
Sbjct: 1   MSGLSFRRLAFMLLFAFLVWSSSTGTCHARRGKHWRHSRAASASLSKKKAKSHGSGSHHH 60

Query: 214 EXXXXXXXXXXXQKHXXXXXXXXXXXXQKGSK-FNVLDYGAKGDGNSDDTKAFQAAWADV 390
                        K             +KGS+ FNVLD+GAKGDG++DDTKAFQ+AWA  
Sbjct: 61  GGSKSKPKAPSPPKQEVTPPPPE----KKGSETFNVLDFGAKGDGDTDDTKAFQSAWASA 116

Query: 391 CKVEASTMIVPSGYQFLVGPISFSGPYCQRNILFQLDGTIIAPTNSKAWGKGL 549
           CKVEAST++VPS Y FLVGPISFSGPYC+ NI+FQLDGTIIAPTN+KAWG GL
Sbjct: 117 CKVEASTIVVPSEYVFLVGPISFSGPYCEANIVFQLDGTIIAPTNAKAWGSGL 169


>ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|222851593|gb|EEE89140.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  199 bits (505), Expect = 3e-49
 Identities = 103/180 (57%), Positives = 120/180 (66%), Gaps = 6/180 (3%)
 Frame = +1

Query: 28  IDMGDFSFRNLTFAIVIAILVWSSSIDTCNARRGKHWRHGRGTSSSLYKKKGKNQGA--- 198
           ++M  FSFR+L F + I  LVWS+S DTC ARRGKHWR  R   +SL KKKGK+ G    
Sbjct: 2   VNMRGFSFRSLAFMLFIVFLVWSASFDTCIARRGKHWRQSRSNPASLAKKKGKSHGNSHH 61

Query: 199 --HQIIVEXXXXXXXXXXXQKHXXXXXXXXXXXXQKGSK-FNVLDYGAKGDGNSDDTKAF 369
             H  + +                          QKGS  FNVLD+GAKG+G SDDTKAF
Sbjct: 62  QHHSGVSKPKAPPHKAPALPPPAPKEKAPKPSPPQKGSTTFNVLDFGAKGNGKSDDTKAF 121

Query: 370 QAAWADVCKVEASTMIVPSGYQFLVGPISFSGPYCQRNILFQLDGTIIAPTNSKAWGKGL 549
           QAAWA  CKVEAST+IVP+ Y FLVGPISFSGPYCQ NI+FQLDGTIIAP+N+ AWG+GL
Sbjct: 122 QAAWAAACKVEASTLIVPAEYVFLVGPISFSGPYCQANIVFQLDGTIIAPSNANAWGRGL 181


>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  172 bits (436), Expect = 3e-41
 Identities = 86/168 (51%), Positives = 109/168 (64%)
 Frame = +1

Query: 46  SFRNLTFAIVIAILVWSSSIDTCNARRGKHWRHGRGTSSSLYKKKGKNQGAHQIIVEXXX 225
           S ++LT  + IA LVWSS+ + C ARRGKHWR  R  S+SL KKKG + G+         
Sbjct: 2   SSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQNRDASASLSKKKGSHGGSKNHH-SGAP 60

Query: 226 XXXXXXXXQKHXXXXXXXXXXXXQKGSKFNVLDYGAKGDGNSDDTKAFQAAWADVCKVEA 405
                   ++                + FNVLD+GAKG+G +DDTKAF+ AWA+ CKVE 
Sbjct: 61  PSPLPPKPKEEIVQTPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWAEACKVEG 120

Query: 406 STMIVPSGYQFLVGPISFSGPYCQRNILFQLDGTIIAPTNSKAWGKGL 549
           ST++VP+ Y F VGPISFSGPYCQ +I+FQLDGTIIAPT+ + WGKGL
Sbjct: 121 STVMVPADYVFFVGPISFSGPYCQPDIIFQLDGTIIAPTDHQTWGKGL 168


>gb|ABV25001.1| polygalacturonase 4 [Oncidium Gower Ramsey]
          Length = 483

 Score =  166 bits (421), Expect = 2e-39
 Identities = 86/175 (49%), Positives = 105/175 (60%), Gaps = 3/175 (1%)
 Frame = +1

Query: 34  MGDFSFRNLTFAIVIAILVWSSSIDTCNARRGKHWRHGRGTSSSLYKKKGKNQ---GAHQ 204
           M  FSF+     +++ +L+   + + C ARRGKHW+  R   SSL KKKGK +   G+H 
Sbjct: 1   MAGFSFKGYVLMLLLILLLLCYNFEVCEARRGKHWKQRRIPDSSLTKKKGKGKAGGGSHN 60

Query: 205 IIVEXXXXXXXXXXXQKHXXXXXXXXXXXXQKGSKFNVLDYGAKGDGNSDDTKAFQAAWA 384
                          +                 S FNVLD+GAKGDG +DDTKAF+ AW 
Sbjct: 61  -------NHHGGGGGKNPAPMPSPCPSPSSSHNSMFNVLDFGAKGDGVTDDTKAFEDAWM 113

Query: 385 DVCKVEASTMIVPSGYQFLVGPISFSGPYCQRNILFQLDGTIIAPTNSKAWGKGL 549
             C+VEASTM +PS Y FLVGPISFSGPYCQ NI+FQLDGTI+APTNSK W  GL
Sbjct: 114 SACQVEASTMQIPSDYTFLVGPISFSGPYCQPNIIFQLDGTIVAPTNSKIWSSGL 168


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