BLASTX nr result

ID: Atractylodes21_contig00018911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018911
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...   120   1e-25
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   115   3e-24
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]   115   5e-24
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   114   1e-23
emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]   112   2e-23

>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 6/119 (5%)
 Frame = -1

Query: 362 FDEKVFPVLGGDNDTQRLVTQEITWNASQILNPDPRSGQCEYEVQKIINLQRTANELPDA 183
           FDE V+P LGG++ +   + +EI WN+S + + DPR+ QCE EVQ+II LQ  AN+LPDA
Sbjct: 182 FDESVYPTLGGEHKS---LGKEIDWNSSSLSHLDPRTNQCEQEVQRIIYLQNIANQLPDA 238

Query: 182 FTNTNRVTKSHIPASNAPAQIQVIPDEVTIQR------KRGRPIDSRDKNPRKRKEQNN 24
           FTN  R+TKS+IPA NAP ++ +   ++          KRGRPI S+DKNPRKRK  N+
Sbjct: 239 FTNLPRITKSYIPAVNAPVRVDIPTGQIVKANESRPHLKRGRPIGSKDKNPRKRKGIND 297


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
 Frame = -1

Query: 362  FDEKVFPVLGGDNDTQRLVTQEITWNASQILNPDPRSGQCEYEVQKIINLQRTANELPDA 183
            F+E VFP LG +        +EI+W  S + + DPR+ QCE EVQ+II+LQ  AN+LPDA
Sbjct: 750  FNESVFPSLGREKSIPE-ERREISWKTSAMTHLDPRTNQCELEVQRIIHLQNLANQLPDA 808

Query: 182  FTNTNRVTKSHIPASNAPAQIQV----IPDEVTIQRKRGRPIDSRDKNPRKRKEQNNI 21
            F +T +VTKSHIPA+N PA+I V    + +E  I+ KRGRP+ S+D  PRKR+ Q  +
Sbjct: 809  FIDTKKVTKSHIPAANTPARIDVPVGQLTNESKIRLKRGRPVGSKDVTPRKRRTQEKL 866


>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
          Length = 1360

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
 Frame = -1

Query: 362 FDEKVFPVLGGDNDTQRLVTQEITWNASQILNPDPRSGQCEYEVQKIINLQRTANELPDA 183
           F+E VFP LG +        +EI+W  S + + DPR+ QCE EVQ+II+LQ  AN+LPDA
Sbjct: 616 FNESVFPSLGREKSIPE-ERREISWKTSTMTHLDPRTNQCELEVQRIIHLQNLANQLPDA 674

Query: 182 FTNTNRVTKSHIPASNAPAQIQV----IPDEVTIQRKRGRPIDSRDKNPRKRKEQNNI 21
           F +T +VTKSHIPA+N PA I V    + +E  I+ KRGRP+ S+D  PRKR+ Q  +
Sbjct: 675 FIDTKKVTKSHIPAANTPAXIDVPXGXLTNESKIRLKRGRPVGSKDVTPRKRRTQEKL 732


>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/118 (49%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
 Frame = -1

Query: 362  FDEKVFPVLGGDNDTQRLVTQEITWNASQILNPDPRSGQCEYEVQKIINLQRTANELPDA 183
            F+E VFP LG +        +EI+W  S + + DPR+ QCE EVQ+II+LQ  AN+LPDA
Sbjct: 752  FNESVFPSLGREKSIPE-ERREISWKTSTMTHLDPRTNQCELEVQRIIHLQNLANQLPDA 810

Query: 182  FTNTNRVTKSHIPASNAPAQIQV----IPDEVTIQRKRGRPIDSRDKNPRKRKEQNNI 21
            F +T +VTKSHIP +N PA+I V    + +E  I+ KRGRP+ S+D  PRKR+ Q  +
Sbjct: 811  FIDTKKVTKSHIPXANTPARIDVPVGQLTNESKIRLKRGRPVGSKDVTPRKRRTQEKL 868


>emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]
          Length = 805

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/118 (48%), Positives = 78/118 (66%), Gaps = 4/118 (3%)
 Frame = -1

Query: 362 FDEKVFPVLGGDNDTQRLVTQEITWNASQILNPDPRSGQCEYEVQKIINLQRTANELPDA 183
           F+E VFP LG +        +EI+W  S + + DPR+ QCE EVQ+II+ Q  AN+LPDA
Sbjct: 145 FNESVFPSLGREKSIPE-ERREISWKTSTMTHLDPRTNQCELEVQRIIHFQNLANQLPDA 203

Query: 182 FTNTNRVTKSHIPASNAPAQIQV----IPDEVTIQRKRGRPIDSRDKNPRKRKEQNNI 21
           F +T +VTKSHIP +N PA+I V    + +E  I+ KRGRP+ S+D  PRKR+ Q  +
Sbjct: 204 FIDTKKVTKSHIPTANTPARIDVPVGQLTNESKIRLKRGRPVGSKDVTPRKRRTQEKL 261


Top