BLASTX nr result

ID: Atractylodes21_contig00018899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018899
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265...   409   e-112
ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricin...   406   e-111
ref|XP_002317230.1| chromatin remodeling complex subunit [Populu...   382   e-103
ref|XP_004134959.1| PREDICTED: ATP-dependent helicase ULS1-like ...   381   e-103
ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805...   376   e-102

>ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265351 [Vitis vinifera]
          Length = 1430

 Score =  409 bits (1050), Expect = e-112
 Identities = 228/366 (62%), Positives = 255/366 (69%), Gaps = 20/366 (5%)
 Frame = -3

Query: 1039 DPDICILEDMSEPVPKKQSPVDGKSVVTAQRLSLGAPQTQLGFNNTRLKTNDERFIYRAV 860
            D DICILED+SEPV    S + GKS+V+ QR S     T  G    R +TNDER I+R  
Sbjct: 590  DTDICILEDISEPVRSNSSLLLGKSLVSTQRYSDSLHNT--GVVGMRNRTNDERLIFRVA 647

Query: 859  LQDLSQPKSEATPPDGALAVPLLRHQRIALSWMVQKETKSMHCFGGILADDQGLGKTIST 680
            LQDLSQPKSEA+PPDG L VPLLRHQRIALSWMVQKET S+HC GGILADDQGLGKT+ST
Sbjct: 648  LQDLSQPKSEASPPDGVLTVPLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTVST 707

Query: 679  IALILKERSPSSNVGAIETKKEVPETLNLXXXXXDEAVTELDKFKQNTEPCAMTT----- 515
            IALILKER  SS     + K+   ETLNL     D+ V ELD  KQ  + C + +     
Sbjct: 708  IALILKERPTSSRACQEDMKQSELETLNL--DEDDDKVPELDGTKQAADSCEVMSHGSSM 765

Query: 514  ---------KSRPAAGTLVVCPTSVLRQWNDELHXXXXXXXXXXXXVYHGGNRTKDASEL 362
                     K RPAAGTLVVCPTSVLRQW +EL             VYHG NRTKD  EL
Sbjct: 766  KKENAFVQGKGRPAAGTLVVCPTSVLRQWAEELRSKVTSKANLSVLVYHGSNRTKDPCEL 825

Query: 361  AKYDVVLTTYAIVSMEVPKQPLVDGED-DKTKKRNNFHPVGLSSTKKRKYPPTSGK---- 197
            A+YDVVLTTY+IVSMEVPKQPLVD +D +K K   +  P  LSS KKRKYPP+S K    
Sbjct: 826  ARYDVVLTTYSIVSMEVPKQPLVDKDDEEKVKPEAHVSPTELSSNKKRKYPPSSDKKCLK 885

Query: 196  -SSKMDDDVFEGNARPLAKVRWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPI 20
                MD  + E  ARPLA+V WFRVVLDEAQSIKN++TQVARACWGLRAKRRWCLSGTPI
Sbjct: 886  DKKAMDGALLESVARPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPI 945

Query: 19   QNAIDD 2
            QNA+DD
Sbjct: 946  QNAVDD 951


>ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223539303|gb|EEF40894.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1109

 Score =  406 bits (1043), Expect = e-111
 Identities = 226/368 (61%), Positives = 258/368 (70%), Gaps = 22/368 (5%)
 Frame = -3

Query: 1039 DPDICILEDMSEPVPKKQSPVDGKSVVTAQRLSLGAPQTQLGFNNTRLKTNDERFIYRAV 860
            D DICILED+S+P    QS   GK+ +  Q  + G      G    R K NDERFI++A 
Sbjct: 549  DSDICILEDISQPARSHQSLAFGKAHIPLQHSAYGDFSHYTGVATARPKANDERFIFQAA 608

Query: 859  LQDLSQPKSEATPPDGALAVPLLRHQRIALSWMVQKETKSMHCFGGILADDQGLGKTIST 680
            LQDLSQPKSEAT P+G LAVPL+RHQRIALSWMVQKET S++C GGILADDQGLGKT+ST
Sbjct: 609  LQDLSQPKSEATLPEGVLAVPLMRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVST 668

Query: 679  IALILKERSPSSNVGAIETKKEVPETLNLXXXXXDEAVTELDKFKQNTEPCAM------- 521
            IALILKER PS        KKE  ETLNL     D+ V+E+ + K++ E C +       
Sbjct: 669  IALILKERPPSVKADLKIVKKEELETLNL--DEDDDEVSEVGQRKEDAESCQVKSNLGPG 726

Query: 520  -------TTKSRPAAGTLVVCPTSVLRQWNDELHXXXXXXXXXXXXVYHGGNRTKDASEL 362
                    +K RPAAGTL+VCPTSVLRQW +ELH            VYHG NRTKD   L
Sbjct: 727  NGINTFGQSKGRPAAGTLIVCPTSVLRQWAEELHKKVTSEANLSVLVYHGSNRTKDPFLL 786

Query: 361  AKYDVVLTTYAIVSMEVPKQPLVDGEDDKTKKR---NNFHPVGLSSTKKRKYPPTSGKSS 191
            AKYDVVLTTY+IVSMEVPKQPLV GEDD  K +   ++   +GLSS+KKRKYPPTSGK  
Sbjct: 787  AKYDVVLTTYSIVSMEVPKQPLV-GEDDDEKVKVEGDDVASLGLSSSKKRKYPPTSGKKG 845

Query: 190  K-----MDDDVFEGNARPLAKVRWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGT 26
                  M+  + E  ARPLAKV WFRVVLDEAQSIKN++TQVARACWGLRAKRRWCLSGT
Sbjct: 846  SRNKKGMEAALLESAARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGT 905

Query: 25   PIQNAIDD 2
            PIQNAIDD
Sbjct: 906  PIQNAIDD 913


>ref|XP_002317230.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222860295|gb|EEE97842.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 800

 Score =  382 bits (980), Expect = e-103
 Identities = 204/323 (63%), Positives = 234/323 (72%), Gaps = 22/323 (6%)
 Frame = -3

Query: 904 TRLKTNDERFIYRAVLQDLSQPKSEATPPDGALAVPLLRHQRIALSWMVQKETKSMHCFG 725
           TR + NDER + R  LQDL+QP SEA PPDG LAVPL+RHQRIALSWMVQKET S+HC G
Sbjct: 12  TRFRANDERLVLRVALQDLAQPNSEAVPPDGVLAVPLMRHQRIALSWMVQKETSSLHCSG 71

Query: 724 GILADDQGLGKTISTIALILKERSPSSNVGAIETKKEVPETLNLXXXXXDEAVTELDKFK 545
           GILADDQGLGKT+STIALILKER+PS    A+  KKE  ETLNL     D+ VTE+D+ K
Sbjct: 72  GILADDQGLGKTVSTIALILKERAPSHRADAVAVKKEECETLNL--DDDDDGVTEIDRMK 129

Query: 544 QNTEPCAMT--------------TKSRPAAGTLVVCPTSVLRQWNDELHXXXXXXXXXXX 407
           +  +   +T              +K RPAAGTL+VCPTSVLRQW+DEL            
Sbjct: 130 KGADGSQVTSNHSSTKSLNSSGQSKGRPAAGTLIVCPTSVLRQWDDELRKKVTTEANLSV 189

Query: 406 XVYHGGNRTKDASELAKYDVVLTTYAIVSMEVPKQPLVDGEDDKTKKR---NNFHPVGLS 236
            VYHG NRTKD SELAKYDVV+TTY+IVSMEVP+QPL D EDD+ K+R   ++   +G S
Sbjct: 190 LVYHGSNRTKDPSELAKYDVVITTYSIVSMEVPRQPLAD-EDDEEKRRMEGDDAPRLGFS 248

Query: 235 STKKRKYPPTSGKSSK-----MDDDVFEGNARPLAKVRWFRVVLDEAQSIKNYKTQVARA 71
            +KKRK PP+ GK        MD  + E  ARPLAKV WFRVVLDEAQSIKN++T VARA
Sbjct: 249 YSKKRKNPPSFGKKGSKNKKGMDSAMLESIARPLAKVAWFRVVLDEAQSIKNHRTHVARA 308

Query: 70  CWGLRAKRRWCLSGTPIQNAIDD 2
           CWGLRAKRRWCLSGTPIQNAIDD
Sbjct: 309 CWGLRAKRRWCLSGTPIQNAIDD 331


>ref|XP_004134959.1| PREDICTED: ATP-dependent helicase ULS1-like [Cucumis sativus]
          Length = 1286

 Score =  381 bits (978), Expect = e-103
 Identities = 219/364 (60%), Positives = 246/364 (67%), Gaps = 18/364 (4%)
 Frame = -3

Query: 1039 DPDICILEDMSEPVPKKQSPVDGKSVVTAQRLSLGAPQTQLGFNNTRLKTNDERFIYRAV 860
            DPDICI+EDMS P P  +S + GKSV +     +    T +G  + R K  D   I +  
Sbjct: 449  DPDICIIEDMSHPAPSNRSLMVGKSVASQSFSIVSGSSTYMGIGSLRQKAKDID-ILKVA 507

Query: 859  LQDLSQPKSEATPPDGALAVPLLRHQRIALSWMVQKETKSMHCFGGILADDQGLGKTIST 680
            LQDLSQPKSE +PPDGAL VPLLRHQRIALSWMVQKET S+ C GGILADDQGLGKTIST
Sbjct: 508  LQDLSQPKSETSPPDGALDVPLLRHQRIALSWMVQKETSSVPCAGGILADDQGLGKTIST 567

Query: 679  IALILKERSPSSNVGAIETKKEVPETLNLXXXXXDEAVTELDK--FKQNTEP-------- 530
            IALILKER+P      +  K E  ETLNL          +  K  F     P        
Sbjct: 568  IALILKERAPIRACPTV--KHEELETLNLDEDDDIHPEHDGPKQEFSHQVSPSKDLTLSK 625

Query: 529  -CAMTTKSRPAAGTLVVCPTSVLRQWNDELHXXXXXXXXXXXXVYHGGNRTKDASELAKY 353
              ++  K RPAAGTLVVCPTSVLRQW DELH            VYHG +RTKD  ELAKY
Sbjct: 626  NTSVQAKGRPAAGTLVVCPTSVLRQWADELHNKVSSKANLSVLVYHGSSRTKDPCELAKY 685

Query: 352  DVVLTTYAIVSMEVPKQPLVDGEDDK--TKKRNNFHPVGLSSTKKRK-YPPTSGKSSK-- 188
            DVVLTTY+IVSMEVPKQ +VD EDD+    +     P  LSS+KKRK +  +  K SK  
Sbjct: 686  DVVLTTYSIVSMEVPKQSVVDEEDDEKHNTEEQAILPSHLSSSKKRKNFSGSDKKHSKNK 745

Query: 187  --MDDDVFEGNARPLAKVRWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQN 14
              +D++VFE  ARPLAKVRWFRVVLDEAQSIKN+KTQVARACWGLRAKRRWCLSGTPIQN
Sbjct: 746  KGVDNEVFESVARPLAKVRWFRVVLDEAQSIKNHKTQVARACWGLRAKRRWCLSGTPIQN 805

Query: 13   AIDD 2
            AIDD
Sbjct: 806  AIDD 809


>ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805307 [Glycine max]
          Length = 1307

 Score =  376 bits (966), Expect = e-102
 Identities = 212/360 (58%), Positives = 249/360 (69%), Gaps = 14/360 (3%)
 Frame = -3

Query: 1039 DPDICILEDMSEPVPKKQSPVDGKSVVTAQRLSLGAPQTQLGFNNTRLKTNDERFIYRAV 860
            D D+CI+ED+S P P  +S V G S++T+Q    G   + +   +   K  DE++I R  
Sbjct: 476  DSDVCIIEDISHPAPISRSTVLGNSLITSQSSRGGYTHSYM-VGSMGPKARDEQYILRVA 534

Query: 859  LQDLSQPKSEATPPDGALAVPLLRHQRIALSWMVQKETKSMHCFGGILADDQGLGKTIST 680
            LQDLSQPKSE +PPDG LAVPLLRHQRIALSWMVQKET S++C GGILADDQGLGKT+ST
Sbjct: 535  LQDLSQPKSEVSPPDGLLAVPLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVST 594

Query: 679  IALILKERSPSSNVGAIETKKEVPETLNLXXXXXDEAVTELDKFKQNTEPCAMTT----- 515
            I LILKER P  N      K E+ ETLNL     D+ + E    K  +  C +++     
Sbjct: 595  IGLILKERPPLLNKCNNAQKSEL-ETLNL--DADDDQLPENGIVKNESNMCQVSSRNPNQ 651

Query: 514  --------KSRPAAGTLVVCPTSVLRQWNDELHXXXXXXXXXXXXVYHGGNRTKDASELA 359
                    K RP+AGTL+VCPTSVLRQW +ELH            VYHG NRTK+  ELA
Sbjct: 652  NMNLLLHAKGRPSAGTLIVCPTSVLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELA 711

Query: 358  KYDVVLTTYAIVSMEVPKQPLVDGEDDKTKKRNNFHPVGLSSTKKRKYPPTSGKSSK-MD 182
            KYDVVLTTY+IVSMEVPKQPLVD +DD+ K   + H V   S+KKRK PP+S    K +D
Sbjct: 712  KYDVVLTTYSIVSMEVPKQPLVD-KDDEEKGTYDDHAV---SSKKRKCPPSSKSGKKGLD 767

Query: 181  DDVFEGNARPLAKVRWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNAIDD 2
              + E  ARPLAKV WFRVVLDEAQSIKN++TQVARACWGLRAKRRWCLSGTPIQNAIDD
Sbjct: 768  SAMLEAVARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDD 827


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