BLASTX nr result

ID: Atractylodes21_contig00018879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018879
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630282.1| Histone deacetylase [Medicago truncatula] gi...    87   2e-15
gb|AFK45229.1| unknown [Lotus japonicus]                               87   2e-15
ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...    85   1e-14
ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana] g...    83   3e-14
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...    82   7e-14

>ref|XP_003630282.1| Histone deacetylase [Medicago truncatula]
           gi|355524304|gb|AET04758.1| Histone deacetylase
           [Medicago truncatula]
          Length = 420

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 57/164 (34%), Positives = 75/164 (45%)
 Frame = +2

Query: 116 FPLGPHVGMWENHHSLISIMRSRFFPKHLTSCRKCSTVYISCSSEHLNAPHKTNESTAKV 295
           F L  HV  W+NH   +               +KC    I CSS+    P     S A++
Sbjct: 20  FLLNHHVNKWKNHRHKV--------------VKKCLGASIYCSSD---VPSIQQLSHARL 62

Query: 296 IYSVAPAVGHNKEAHPECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 475
           IYSVAP++GHN+E+HPE                                           
Sbjct: 63  IYSVAPSMGHNQESHPESHFRVPAIVTALQQM---------------------------- 94

Query: 476 XXELTPKFRGSEIIQLQNFRTATAEDIASVHARSYIFGLEKAME 607
             +LT KFRGSE+I+LQNF  A+ +DIASVHAR+Y+ GLEK M+
Sbjct: 95  --KLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKVMD 136


>gb|AFK45229.1| unknown [Lotus japonicus]
          Length = 413

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 54/135 (40%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
 Frame = +2

Query: 209 CRKCSTVYISCSSEHLNA--PHKTNESTAKVIYSVAPAVGHNKEAHPECXXXXXXXXXXX 382
           CRK   V   CS    N+  P     S A+VIYSVAP++GHN+E+HPE            
Sbjct: 25  CRKSQRVVNRCSFRISNSSLPSIEQLSDARVIYSVAPSMGHNQESHPESHFRVPSIVNAL 84

Query: 383 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTPKFRGSEIIQLQNFRTATAEDIAS 562
                                            +LTPKFRGSEII+LQ+F  A+ +DIAS
Sbjct: 85  EEM------------------------------KLTPKFRGSEIIELQHFEPASVDDIAS 114

Query: 563 VHARSYIFGLEKAME 607
           VHAR+Y+FGLEK M+
Sbjct: 115 VHARAYVFGLEKVMD 129


>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa]
           gi|222856484|gb|EEE94031.1| histone deacetylase [Populus
           trichocarpa]
          Length = 390

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 54/133 (40%), Positives = 67/133 (50%)
 Frame = +2

Query: 209 CRKCSTVYISCSSEHLNAPHKTNESTAKVIYSVAPAVGHNKEAHPECXXXXXXXXXXXXX 388
           C K S   ISCS      P     + A+VIYSVAPA+GHN+EAHPE              
Sbjct: 4   CTKRSGFSISCSYSLDKDPLIEKLTDARVIYSVAPAMGHNQEAHPESYLRVPAIVSALEK 63

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTPKFRGSEIIQLQNFRTATAEDIASVH 568
                                          ELT KFRGSEII+LQ+F+ A+ +DIA+VH
Sbjct: 64  A------------------------------ELTSKFRGSEIIELQDFKPASLDDIANVH 93

Query: 569 ARSYIFGLEKAME 607
           AR+Y+ GLEKAM+
Sbjct: 94  ARAYVAGLEKAMD 106


>ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana]
           gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName:
           Full=Histone deacetylase 14 gi|15529220|gb|AAK97704.1|
           AT4g33470/F17M5_230 [Arabidopsis thaliana]
           gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230
           [Arabidopsis thaliana] gi|332660831|gb|AEE86231.1|
           histone deacetylase 14 [Arabidopsis thaliana]
          Length = 423

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/107 (42%), Positives = 59/107 (55%)
 Frame = +2

Query: 287 AKVIYSVAPAVGHNKEAHPECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 466
           A++IYSV+ A+GHNKE+HPEC                                       
Sbjct: 63  ARLIYSVSAALGHNKESHPECSARVPAIVNALEMN------------------------- 97

Query: 467 XXXXXELTPKFRGSEIIQLQNFRTATAEDIASVHARSYIFGLEKAME 607
                ELTPKFRGS+I++L NF+TAT EDIA+VH ++Y+FGLEKAM+
Sbjct: 98  -----ELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMD 139


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
           gi|223544531|gb|EEF46048.1| Histone deacetylase,
           putative [Ricinus communis]
          Length = 425

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
 Frame = +2

Query: 173 MRSRFFPKHLTS----CRKCSTVYISCSS---EHLNAPHKTNESTAKVIYSVAPAVGHNK 331
           +R R F +H+ S    C +     I CS+   +  N P     + A++IYSVAPA+GHN+
Sbjct: 20  LRCRHFSQHVMSSRDHCNRSIRACICCSNSFEKDPNLPSIQQLTDARIIYSVAPAMGHNQ 79

Query: 332 EAHPECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELTPKFRGSE 511
           E+HPE                                             EL+ KFRG E
Sbjct: 80  ESHPESHLRVPAIVTALEKM------------------------------ELSAKFRGPE 109

Query: 512 IIQLQNFRTATAEDIASVHARSYIFGLEKAME 607
           II+LQ+F+ A+A DIASVHA++Y+ GLEKAM+
Sbjct: 110 IIELQHFKPASAIDIASVHAKAYVAGLEKAMD 141


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