BLASTX nr result

ID: Atractylodes21_contig00018801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018801
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit c...   100   9e-20
ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif...    99   3e-19
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]      99   4e-19
ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]      99   4e-19
ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18

>ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit clp1p, putative [Ricinus
           communis] gi|223543478|gb|EEF45009.1|
           cleavage/polyadenylation factor ia subunit clp1p,
           putative [Ricinus communis]
          Length = 431

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = -3

Query: 177 MKQVKLEKESELRIEVNVNSSLRLKLLSGTAEIFGTEMPPENWLIFPPRMKFAIFTWYG 1
           MKQVKLE+ESELRIEV  ++ LRL+LL+GTAEIFGTE+PPE WL FPPR+KFA+FTWYG
Sbjct: 14  MKQVKLERESELRIEVANDTPLRLRLLNGTAEIFGTELPPEMWLTFPPRLKFAVFTWYG 72


>ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera]
           gi|296087785|emb|CBI35041.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/59 (74%), Positives = 54/59 (91%)
 Frame = -3

Query: 177 MKQVKLEKESELRIEVNVNSSLRLKLLSGTAEIFGTEMPPENWLIFPPRMKFAIFTWYG 1
           ++QVKLEKE ELR+EV+ N+ LRL+LL+GTAEIFGTE+PPE WL FPPR+KFA+FTWYG
Sbjct: 7   IRQVKLEKECELRVEVSENAPLRLRLLNGTAEIFGTEIPPEIWLSFPPRLKFAVFTWYG 65


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/59 (76%), Positives = 54/59 (91%)
 Frame = -3

Query: 177 MKQVKLEKESELRIEVNVNSSLRLKLLSGTAEIFGTEMPPENWLIFPPRMKFAIFTWYG 1
           +KQVKLE+ESELRIEV  ++ LRL+LL+GTAEIFGTE+PPE WL FPPR+KFA+FTWYG
Sbjct: 18  IKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKFAVFTWYG 76


>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/59 (76%), Positives = 54/59 (91%)
 Frame = -3

Query: 177 MKQVKLEKESELRIEVNVNSSLRLKLLSGTAEIFGTEMPPENWLIFPPRMKFAIFTWYG 1
           +KQVKLE+ESELRIEV  ++ LRL+LL+GTAEIFGTE+PPE WL FPPR+KFA+FTWYG
Sbjct: 12  IKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKFAVFTWYG 70


>ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/58 (74%), Positives = 51/58 (87%)
 Frame = -3

Query: 174 KQVKLEKESELRIEVNVNSSLRLKLLSGTAEIFGTEMPPENWLIFPPRMKFAIFTWYG 1
           +QVKLEKESELRIEV  ++ LRL+LL+GTAEIFGTE+PP+ WL FPP  KFA+FTWYG
Sbjct: 13  RQVKLEKESELRIEVANDTPLRLRLLNGTAEIFGTELPPQIWLTFPPHFKFAVFTWYG 70


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