BLASTX nr result

ID: Atractylodes21_contig00018741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018741
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26949.3| unnamed protein product [Vitis vinifera]              398   e-109
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   398   e-109
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   398   e-109
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   393   e-107
ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   384   e-104

>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  398 bits (1023), Expect = e-109
 Identities = 203/253 (80%), Positives = 213/253 (84%)
 Frame = -1

Query: 761  LNNTPCLLPSWISKVSAKQVH*FSFSLLDIQRRGRAGRVQPGECYHLYPRCVYDAFADYQ 582
            LNNTPCLLPSWISKVSA+Q            RRGRAGRVQPG+CYHLYPRCVYDAFADYQ
Sbjct: 655  LNNTPCLLPSWISKVSAQQ------------RRGRAGRVQPGKCYHLYPRCVYDAFADYQ 702

Query: 581  LPEILRTPLQSLCLQIKSLKLGSISEFLSKASQSPELLAVQNAIEYLKIIGALDESENLT 402
            LPEILRTPLQSLCLQIKSLKLGSISEFLS+A QSPELLAVQNAIEYLKIIGALDE+ENLT
Sbjct: 703  LPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLT 762

Query: 401  VLGRYLTMLPVEPKLGKMLILGAILNCLDPILTVVAGLSVRDPFXXXXXXXXXXXXXXAQ 222
            VLGR+LTMLP+EPKLGKMLILGA+ NCLDPILT+VAGLSVRDPF              AQ
Sbjct: 763  VLGRHLTMLPMEPKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEAAKAQ 822

Query: 221  FSCDYSDHLALVRAYEGWKVAELDLAGYEYCWKNFLSAQSMKAIDSLRREFQSLLKDTGL 42
            FS DYSDHLALVRAYEGWK AE D  GYEYCWKNFLSAQSMKAIDSLR+EF SLLKDT L
Sbjct: 823  FSHDYSDHLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLLKDTDL 882

Query: 41   IDSNTTMYNTWSY 3
            +D N   YN WSY
Sbjct: 883  VDGNMATYNAWSY 895


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score =  398 bits (1023), Expect = e-109
 Identities = 203/253 (80%), Positives = 213/253 (84%)
 Frame = -1

Query: 761  LNNTPCLLPSWISKVSAKQVH*FSFSLLDIQRRGRAGRVQPGECYHLYPRCVYDAFADYQ 582
            LNNTPCLLPSWISKVSA+Q            RRGRAGRVQPG+CYHLYPRCVYDAFADYQ
Sbjct: 669  LNNTPCLLPSWISKVSAQQ------------RRGRAGRVQPGKCYHLYPRCVYDAFADYQ 716

Query: 581  LPEILRTPLQSLCLQIKSLKLGSISEFLSKASQSPELLAVQNAIEYLKIIGALDESENLT 402
            LPEILRTPLQSLCLQIKSLKLGSISEFLS+A QSPELLAVQNAIEYLKIIGALDE+ENLT
Sbjct: 717  LPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLT 776

Query: 401  VLGRYLTMLPVEPKLGKMLILGAILNCLDPILTVVAGLSVRDPFXXXXXXXXXXXXXXAQ 222
            VLGR+LTMLP+EPKLGKMLILGA+ NCLDPILT+VAGLSVRDPF              AQ
Sbjct: 777  VLGRHLTMLPMEPKLGKMLILGAVFNCLDPILTIVAGLSVRDPFLTPLDKKDLAEAAKAQ 836

Query: 221  FSCDYSDHLALVRAYEGWKVAELDLAGYEYCWKNFLSAQSMKAIDSLRREFQSLLKDTGL 42
            FS DYSDHLALVRAYEGWK AE D  GYEYCWKNFLSAQSMKAIDSLR+EF SLLKDT L
Sbjct: 837  FSHDYSDHLALVRAYEGWKDAEKDQIGYEYCWKNFLSAQSMKAIDSLRKEFFSLLKDTDL 896

Query: 41   IDSNTTMYNTWSY 3
            +D N   YN WSY
Sbjct: 897  VDGNMATYNAWSY 909


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
            predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  398 bits (1023), Expect = e-109
 Identities = 201/253 (79%), Positives = 215/253 (84%)
 Frame = -1

Query: 761  LNNTPCLLPSWISKVSAKQVH*FSFSLLDIQRRGRAGRVQPGECYHLYPRCVYDAFADYQ 582
            LNNTPCLLPSWISKVSA+Q            RRGRAGRVQPGECYHLYPRCVYDAFA+YQ
Sbjct: 531  LNNTPCLLPSWISKVSAQQ------------RRGRAGRVQPGECYHLYPRCVYDAFAEYQ 578

Query: 581  LPEILRTPLQSLCLQIKSLKLGSISEFLSKASQSPELLAVQNAIEYLKIIGALDESENLT 402
            LPEILRTPLQS+CLQIKSLKLGSIS+FLS+A QSPELLAVQNAIEYLKIIGALD++ENLT
Sbjct: 579  LPEILRTPLQSICLQIKSLKLGSISDFLSRALQSPELLAVQNAIEYLKIIGALDQNENLT 638

Query: 401  VLGRYLTMLPVEPKLGKMLILGAILNCLDPILTVVAGLSVRDPFXXXXXXXXXXXXXXAQ 222
            VLGRYLTMLPVEPKLGKML+LGAILNCLDP+LTVVAGLSVRDPF              +Q
Sbjct: 639  VLGRYLTMLPVEPKLGKMLVLGAILNCLDPVLTVVAGLSVRDPFLMPLDKKDLAEAAKSQ 698

Query: 221  FSCDYSDHLALVRAYEGWKVAELDLAGYEYCWKNFLSAQSMKAIDSLRREFQSLLKDTGL 42
            FS DYSDHLALVRAYEGWK AE DL+GYEYCWKNFLS QSMKAIDSLR+EF SLL DTGL
Sbjct: 699  FSGDYSDHLALVRAYEGWKDAERDLSGYEYCWKNFLSVQSMKAIDSLRKEFFSLLMDTGL 758

Query: 41   IDSNTTMYNTWSY 3
            +D N T  N WS+
Sbjct: 759  VDGNPTTCNAWSH 771


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  393 bits (1009), Expect = e-107
 Identities = 196/253 (77%), Positives = 213/253 (84%)
 Frame = -1

Query: 761  LNNTPCLLPSWISKVSAKQVH*FSFSLLDIQRRGRAGRVQPGECYHLYPRCVYDAFADYQ 582
            LNNTPCLLPSWISKVSA+Q            RRGRAGRVQPGECYHLYPRCVYDAFA+YQ
Sbjct: 650  LNNTPCLLPSWISKVSAQQ------------RRGRAGRVQPGECYHLYPRCVYDAFAEYQ 697

Query: 581  LPEILRTPLQSLCLQIKSLKLGSISEFLSKASQSPELLAVQNAIEYLKIIGALDESENLT 402
            LPEILRTPLQSLCLQIKSLKLGSISEFLS+A QSPELLAVQNA EYLKIIGALD++ENLT
Sbjct: 698  LPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQNANEYLKIIGALDQNENLT 757

Query: 401  VLGRYLTMLPVEPKLGKMLILGAILNCLDPILTVVAGLSVRDPFXXXXXXXXXXXXXXAQ 222
            VLG+YLTM P++PKLGKMLILGAI NCLDP+LT+VAGLSVRDPF              +Q
Sbjct: 758  VLGKYLTMFPMQPKLGKMLILGAIFNCLDPVLTIVAGLSVRDPFLTPMDKKDLAEAAKSQ 817

Query: 221  FSCDYSDHLALVRAYEGWKVAELDLAGYEYCWKNFLSAQSMKAIDSLRREFQSLLKDTGL 42
            FSCDYSDHLALVRAYEGWK AE + AGY+YCWKNFLS QSMKAIDSLR+EF SLLKD GL
Sbjct: 818  FSCDYSDHLALVRAYEGWKDAERNFAGYDYCWKNFLSMQSMKAIDSLRKEFLSLLKDAGL 877

Query: 41   IDSNTTMYNTWSY 3
            +D + T  NTWS+
Sbjct: 878  VDGSITFCNTWSH 890


>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1209

 Score =  384 bits (986), Expect = e-104
 Identities = 195/252 (77%), Positives = 208/252 (82%)
 Frame = -1

Query: 761  LNNTPCLLPSWISKVSAKQVH*FSFSLLDIQRRGRAGRVQPGECYHLYPRCVYDAFADYQ 582
            LNNTPCLLP+WISKVSAKQ            RRGRAGRVQPGECYHLYPRCVYDAFA+YQ
Sbjct: 686  LNNTPCLLPTWISKVSAKQ------------RRGRAGRVQPGECYHLYPRCVYDAFAEYQ 733

Query: 581  LPEILRTPLQSLCLQIKSLKLGSISEFLSKASQSPELLAVQNAIEYLKIIGALDESENLT 402
            LPEILRTPLQSLCLQIKSL+LGSISEFLS+A QSPE L VQNAIEYLKIIGALDE ENLT
Sbjct: 734  LPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPETLVVQNAIEYLKIIGALDEDENLT 793

Query: 401  VLGRYLTMLPVEPKLGKMLILGAILNCLDPILTVVAGLSVRDPFXXXXXXXXXXXXXXAQ 222
            +LGR LTMLP+EPKLGKMLILGAI NCLDPILTVVAGLSVRDPF              +Q
Sbjct: 794  ILGRCLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKRDLAEEAKSQ 853

Query: 221  FSCDYSDHLALVRAYEGWKVAELDLAGYEYCWKNFLSAQSMKAIDSLRREFQSLLKDTGL 42
            F   YSDHLALVRAYEGW+ AE+DL GYEYCWKNFLS+QSMKAID+LRREF  L+KD GL
Sbjct: 854  FCGAYSDHLALVRAYEGWRDAEMDLGGYEYCWKNFLSSQSMKAIDALRREFICLVKDIGL 913

Query: 41   IDSNTTMYNTWS 6
            +DSNT   N WS
Sbjct: 914  VDSNTASCNEWS 925


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