BLASTX nr result
ID: Atractylodes21_contig00018718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00018718
(1612 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha... 610 e-172
ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici... 607 e-171
ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li... 602 e-170
ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha... 596 e-168
ref|XP_002865017.1| nitrogen regulation family protein [Arabidop... 595 e-168
>ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
[Cucumis sativus] gi|449484028|ref|XP_004156763.1|
PREDICTED: tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like [Cucumis sativus]
Length = 426
Score = 610 bits (1573), Expect = e-172
Identities = 288/365 (78%), Positives = 326/365 (89%), Gaps = 4/365 (1%)
Frame = -2
Query: 1344 SLVNRESSLLGNPNGYLTGNARIERAWAHWKKLGGPKLIVAPMVDNSELPFRLLCRKYGA 1165
S N + LLG+P GYL+ +RIERAWAHW KLG PKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61 STSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
Query: 1164 EAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFVQFCANDPDTLLEAARRVEPYCDYVD 985
EAAYTPMLHSRIFTENEKYR+ EFTTC+EDRPLFVQFCANDPD LLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
Query: 984 INLGCPQRIAKRGNYGAFLMDKLPLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLKYAKM 805
+NLGCPQRIA+RGNYGAFLMD LPLVK++VEKLA NL VPVSCKIR+FP+LQDT+ YA+M
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
Query: 804 LEDSGCALLAVHGRTRDEKDGKKVRANWKAIRAVKNALRIPVLANGNIRHMDDVKNCLEE 625
LED+GC+LLAVHGRTRDEKDGKK RANW AI AVKNA+RIPVLANGNIRHM+DV +CL+E
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQE 300
Query: 624 TGADGVLSAETLLENPALFAGFRTVEWASDSE----DGKLDQADLVVEYLKLCEKYPVPW 457
TG +GVLSAETLLENPALFAGFRT EW E DG LDQADL+V+YLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
Query: 456 RMIRAHVHKMLGEWFRIHPHVRDDFNAQSILSFEFLYDMVNRLRDLGVSRPLYVKNTFLE 277
RMIR+HVHK+LG+WF+IHPH+R+DFNAQS L+FEFLY+MV RLR+L V PLY+K++
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHAL 420
Query: 276 SVSAN 262
++S+N
Sbjct: 421 AISSN 425
>ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase,
putative [Ricinus communis]
Length = 426
Score = 607 bits (1564), Expect = e-171
Identities = 306/430 (71%), Positives = 352/430 (81%), Gaps = 15/430 (3%)
Frame = -2
Query: 1503 HPPSSSTLPINSPLMAIGSPTQTLAPCPHNSESPTV-------NTEFDICSETIDAYAPE 1345
H P ST PLMA S T+T+A N + + +T F +T+
Sbjct: 8 HKPLLSTSL--KPLMA-SSLTRTVAIDQDNDDDEVLCSSAHQEHTSFSTLPDTVS----- 59
Query: 1344 SLVNRESSLLGN--PNGYLTGNARIERAWAHWKKLGGPKLIVAPMVDNSELPFRLLCRKY 1171
SS LG+ P+ YL G +R++RAWAHW K+G PKL+VAPMVDNSELPFR+LCRKY
Sbjct: 60 ------SSCLGSATPSCYLNGESRVDRAWAHWNKIGKPKLLVAPMVDNSELPFRMLCRKY 113
Query: 1170 GAEAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFVQFCANDPDTLLEAARRVEPYCDY 991
GA+AAYTPMLHSRIFTENEKYR+QEFTTC EDRPLFVQFCANDPD LLEAAR+VEPYCDY
Sbjct: 114 GADAAYTPMLHSRIFTENEKYRTQEFTTCNEDRPLFVQFCANDPDILLEAARKVEPYCDY 173
Query: 990 VDINLGCPQRIAKRGNYGAFLMDKLPLVKSLVEKLALNLNVPVSCKIRVFPDLQDTLKYA 811
VDINLGCPQRIA+RGNYGAFLMD LPLVKSLVEKLALNLNVPVSCKIR+FP L DT+ YA
Sbjct: 174 VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRLFPKLDDTISYA 233
Query: 810 KMLEDSGCALLAVHGRTRDEKDGKKVRANWKAIRAVKNALRIPVLANGNIRHMDDVKNCL 631
+MLE++GC+LLAVHGRTRDEKDGKK RA+WKAI+AV+NA++IP+LANGN+RHMDDV+NCL
Sbjct: 234 RMLEEAGCSLLAVHGRTRDEKDGKKFRADWKAIKAVRNAVKIPLLANGNVRHMDDVRNCL 293
Query: 630 EETGADGVLSAETLLENPALFAGFRTVEWASDSE----DGKLDQADLVVEYLKLCEKYPV 463
EETGADGVLSAE+LLENPALFAGFRT EW E DGKLDQADL+VEYLKLCE+YPV
Sbjct: 294 EETGADGVLSAESLLENPALFAGFRTAEWVVGDEESTRDGKLDQADLLVEYLKLCEEYPV 353
Query: 462 PWRMIRAHVHKMLGEWFRIHPHVRDDFNAQSILSFEFLYDMVNRLRDLGVSRPLYVK--N 289
PWRMIRAHVHKMLG+WFRIHPHVR++ NAQS L+FEFLY++V++LR LGV PLYVK +
Sbjct: 354 PWRMIRAHVHKMLGDWFRIHPHVREELNAQSRLTFEFLYNVVDQLRALGVRIPLYVKDLD 413
Query: 288 TFLESVSANG 259
T V+ANG
Sbjct: 414 TSATGVAANG 423
>ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]
Length = 424
Score = 602 bits (1553), Expect = e-170
Identities = 295/374 (78%), Positives = 330/374 (88%), Gaps = 4/374 (1%)
Frame = -2
Query: 1395 NTEFDICSETIDAYAPESLVNRESSLLGNPNGYLTGNARIERAWAHWKKLGGPKLIVAPM 1216
N + ICSE + +SS P+ LTG +RIERAWAHWKKLG PKLIVAPM
Sbjct: 46 NLDDHICSEQ------QEHQECQSSSADWPSRCLTGESRIERAWAHWKKLGQPKLIVAPM 99
Query: 1215 VDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFTTCKEDRPLFVQFCANDPD 1036
VDNSELPFR+LCRKYGA+AAYTPMLHSRIF+ENEKYRSQEFTTCKEDRPLFVQFCANDPD
Sbjct: 100 VDNSELPFRMLCRKYGAQAAYTPMLHSRIFSENEKYRSQEFTTCKEDRPLFVQFCANDPD 159
Query: 1035 TLLEAARRVEPYCDYVDINLGCPQRIAKRGNYGAFLMDKLPLVKSLVEKLALNLNVPVSC 856
TLLEAA+RVEPYCDYVDINLGCPQRIA+RGNYGAFLMD LPLVKSLVEKLALNL+VPVSC
Sbjct: 160 TLLEAAQRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLHVPVSC 219
Query: 855 KIRVFPDLQDTLKYAKMLEDSGCALLAVHGRTRDEKDGKKVRANWKAIRAVKNALRIPVL 676
KIRVFP+LQDT+ YA+MLED+GC+LLAVHGRTRDEKDGKK RA+W AI+AVKNA+ IPVL
Sbjct: 220 KIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAVSIPVL 279
Query: 675 ANGNIRHMDDVKNCLEETGADGVLSAETLLENPALFAGFRTVEWASDSE----DGKLDQA 508
ANG+IRHMDDV+ CLEETGADGVLSAE+LLENPALFAGF+T EWA E DG+LDQA
Sbjct: 280 ANGDIRHMDDVQRCLEETGADGVLSAESLLENPALFAGFQTAEWALGGEEGNKDGELDQA 339
Query: 507 DLVVEYLKLCEKYPVPWRMIRAHVHKMLGEWFRIHPHVRDDFNAQSILSFEFLYDMVNRL 328
+L+VEYLKLCEKYPVPWRMIR+HVHK+LGEWFRI P VRDD N+QS L+FEFLY+MV++L
Sbjct: 340 NLLVEYLKLCEKYPVPWRMIRSHVHKLLGEWFRIQPQVRDDLNSQSKLTFEFLYNMVDQL 399
Query: 327 RDLGVSRPLYVKNT 286
R+LGV PLY K+T
Sbjct: 400 RELGVRIPLYTKDT 413
>ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
gi|10177609|dbj|BAB10956.1| unnamed protein product
[Arabidopsis thaliana] gi|15146316|gb|AAK83641.1|
AT5g67220/K21H1_18 [Arabidopsis thaliana]
gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18
[Arabidopsis thaliana] gi|332010932|gb|AED98315.1|
tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
Length = 423
Score = 596 bits (1536), Expect = e-168
Identities = 290/391 (74%), Positives = 332/391 (84%), Gaps = 5/391 (1%)
Frame = -2
Query: 1449 SPTQTLAPCPHNSESPTVNTEFDICSETIDAYAPESLVNRESSLLGNPNGYLTGNARIER 1270
S T+ + P P+ + +CSE D E++ +SL G+P+ L+ + R+ER
Sbjct: 19 SQTRAMTQNPDPKPDPSQVLDDILCSEQRDGQIEETVDTAPASL-GSPSRVLSIDTRVER 77
Query: 1269 AWAHWKKLGGPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFT 1090
AWAHWKKLG PK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE EKYR+QEFT
Sbjct: 78 AWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFT 137
Query: 1089 TCKEDRPLFVQFCANDPDTLLEAARRVEPYCDYVDINLGCPQRIAKRGNYGAFLMDKLPL 910
TCKEDRPLFVQFCANDPDTLLEAA+RVEPYCDYVDINLGCPQRIA+RGNYGAFLMD LPL
Sbjct: 138 TCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPL 197
Query: 909 VKSLVEKLALNLNVPVSCKIRVFPDLQDTLKYAKMLEDSGCALLAVHGRTRDEKDGKKVR 730
VKSLVEKLA NLNVPVSCKIR+FP+L+DTLKYAKMLED+GC+LLAVHGRTRDEKDGKK R
Sbjct: 198 VKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFR 257
Query: 729 ANWKAIRAVKNALRIPVLANGNIRHMDDVKNCLEETGADGVLSAETLLENPALFAGFRTV 550
A+W AI+ VKNA+RIPVLANGN+R ++DV NC++ETG +GVLSAETLLENPA FAGFRT
Sbjct: 258 ADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTA 317
Query: 549 EWASDSE-----DGKLDQADLVVEYLKLCEKYPVPWRMIRAHVHKMLGEWFRIHPHVRDD 385
EWA D+E DG LDQ DLVVEYLKLCEK+PVPWRMIR+HVHKMLGEWFRIHP VR+
Sbjct: 318 EWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQ 377
Query: 384 FNAQSILSFEFLYDMVNRLRDLGVSRPLYVK 292
NAQ+IL+FEFLY +V++LR+LG PLY K
Sbjct: 378 LNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408
>ref|XP_002865017.1| nitrogen regulation family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310852|gb|EFH41276.1| nitrogen regulation family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 595 bits (1535), Expect = e-168
Identities = 290/391 (74%), Positives = 333/391 (85%), Gaps = 5/391 (1%)
Frame = -2
Query: 1449 SPTQTLAPCPHNSESPTVNTEFDICSETIDAYAPESLVNRESSLLGNPNGYLTGNARIER 1270
S T+ + P P+ + +CSE D E+ V+ ++ LG+P+ L+ + R+ER
Sbjct: 19 SQTRAMTQNPDPKPDPSKVIDDLLCSEQRDGQIEET-VDAVAASLGSPSRVLSIDTRVER 77
Query: 1269 AWAHWKKLGGPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRSQEFT 1090
AWAHWKKLG PK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE EKYR+QEFT
Sbjct: 78 AWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFT 137
Query: 1089 TCKEDRPLFVQFCANDPDTLLEAARRVEPYCDYVDINLGCPQRIAKRGNYGAFLMDKLPL 910
TCKEDRPLFVQFCANDPDTLLEAA+RVEPYCDYVDINLGCPQRIA+RGNYGAFLMD LPL
Sbjct: 138 TCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPL 197
Query: 909 VKSLVEKLALNLNVPVSCKIRVFPDLQDTLKYAKMLEDSGCALLAVHGRTRDEKDGKKVR 730
VKSLVEKLA NLNVPVSCKIR+FP+LQDTLKYAKMLED+GC+LLAVHGRTRDEKDGKK+R
Sbjct: 198 VKSLVEKLAQNLNVPVSCKIRIFPNLQDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKLR 257
Query: 729 ANWKAIRAVKNALRIPVLANGNIRHMDDVKNCLEETGADGVLSAETLLENPALFAGFRTV 550
A+W AI+ VKNALRIPVL NGN+R ++DV NC++ETG +GVLSAETLLENPA FAGFRT
Sbjct: 258 ADWSAIKEVKNALRIPVLGNGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTA 317
Query: 549 EWASDSE-----DGKLDQADLVVEYLKLCEKYPVPWRMIRAHVHKMLGEWFRIHPHVRDD 385
EW S++E DG LDQ DLVVEYLKLCEK+PVPWRMIR+HVHKMLGEWFRIHP VR+
Sbjct: 318 EWVSENEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRIHPQVREQ 377
Query: 384 FNAQSILSFEFLYDMVNRLRDLGVSRPLYVK 292
NAQ+IL+FEFLY +V++LR+LG PLY K
Sbjct: 378 LNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408