BLASTX nr result

ID: Atractylodes21_contig00018700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018700
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   266   e-132
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        257   e-116
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   241   e-116
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        252   e-114
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    246   e-113

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  266 bits (681), Expect(2) = e-132
 Identities = 134/182 (73%), Positives = 153/182 (84%), Gaps = 4/182 (2%)
 Frame = +2

Query: 83  APKILLAKPALVT----AAKYNRXXXXXXXXXXXDDASSSLRTRLPSVGFLNLLSDSWDF 250
           APKILLAKP LVT    ++K  R           +D S SLR+RLP +G LNLLSDSW+F
Sbjct: 18  APKILLAKPGLVTTGSVSSKLIRSGAAGGGGGGAEDESVSLRSRLPPIGSLNLLSDSWEF 77

Query: 251 HTDRFLPFLTDNTDFTVIGVIGPAGVGKSTIMNEIYGFDATSPGMLPPFAIESVETKVMA 430
           HTDRFLPFLTDNTDFTV+GVIGP GVGKSTIMNE+YGFD +SPGMLPPFAI+S + + MA
Sbjct: 78  HTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPGMLPPFAIQSEDIRAMA 137

Query: 431 KHCTVGIEPRITSERIILLDTQPVYSPSVLAEMIRPDGSSTISVLGGESLPAELAHELMS 610
           +HCTVGIEPRI++ER+ILLDTQPV+SPSVLAEM+RPDGSSTISVLGGESL +ELAHELM 
Sbjct: 138 RHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLGGESLSSELAHELMG 197

Query: 611 IQ 616
           IQ
Sbjct: 198 IQ 199



 Score =  231 bits (590), Expect(2) = e-132
 Identities = 119/201 (59%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
 Frame = +3

Query: 645  LGVLLTSICHIVLVVSEGVHDNNMWRLMATVDLLKHXXXXXXXXXXXXXXXXXXGSDKEI 824
            LGVLL SICHI+LV+S+GVHD NMWRLM TVDLLKH                  GSDKE 
Sbjct: 200  LGVLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDLSSLTPSHSQNSNLGSDKEG 259

Query: 825  KDKIQEVGEEYMASPVFVHTKLHEQDIAPHYFLQLNKALNQYFSSASFNKQKHQNGSKEN 1004
            KDK+ E GEEY+A+P+FVHTKL +QDI P  F+ L KAL Q+FSS++F K+K  N +KE+
Sbjct: 260  KDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQFFSSSTFVKEKCGNTTKEH 319

Query: 1005 ---TVPPTNLDDDSDPAPLKSIFIPSKSNTDSPGTQYESYYSSLWKLRDQVLSMSGPSFS 1175
               +VPP     D D        +P KS  DSP  QYESY S LWKLRDQVLSM+ PSF+
Sbjct: 320  LVSSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSMNCPSFA 379

Query: 1176 RTVSERDWLKNSSKIWELVKN 1238
            RT+SERDWL+NS+KIWELVKN
Sbjct: 380  RTISERDWLRNSAKIWELVKN 400


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  257 bits (657), Expect(2) = e-116
 Identities = 133/182 (73%), Positives = 150/182 (82%), Gaps = 4/182 (2%)
 Frame = +2

Query: 83  APKILLAKPALVT----AAKYNRXXXXXXXXXXXDDASSSLRTRLPSVGFLNLLSDSWDF 250
           +PKILLAKP LVT    A K+ R           DD S  LR+RLPSV  LNLLSDSWDF
Sbjct: 7   SPKILLAKPGLVTGGPVAGKFGRGGGG-------DDDSPQLRSRLPSVASLNLLSDSWDF 59

Query: 251 HTDRFLPFLTDNTDFTVIGVIGPAGVGKSTIMNEIYGFDATSPGMLPPFAIESVETKVMA 430
           H DRFLPFLT+NTDFTVIGVIGP GVGKSTIMNE+YGFD++SPGMLPPFAI+S ET+ MA
Sbjct: 60  HIDRFLPFLTENTDFTVIGVIGPPGVGKSTIMNELYGFDSSSPGMLPPFAIQSEETRAMA 119

Query: 431 KHCTVGIEPRITSERIILLDTQPVYSPSVLAEMIRPDGSSTISVLGGESLPAELAHELMS 610
           +HC+ GIEPRI++ERIILLDTQPV+S SVLAEM+RPDGSSTISVL GE+L AELAHEL+ 
Sbjct: 120 RHCSTGIEPRISTERIILLDTQPVFSASVLAEMMRPDGSSTISVLSGETLSAELAHELIG 179

Query: 611 IQ 616
           IQ
Sbjct: 180 IQ 181



 Score =  190 bits (483), Expect(2) = e-116
 Identities = 104/198 (52%), Positives = 127/198 (64%)
 Frame = +3

Query: 645  LGVLLTSICHIVLVVSEGVHDNNMWRLMATVDLLKHXXXXXXXXXXXXXXXXXXGSDKEI 824
            L VLL SICHI+LVVSEGVHD+++W LM TVDLLKH                  G +K  
Sbjct: 182  LAVLLASICHILLVVSEGVHDDSLWHLMLTVDLLKHGISDPSLMTSSLSQSSSSGLEK-- 239

Query: 825  KDKIQEVGEEYMASPVFVHTKLHEQDIAPHYFLQLNKALNQYFSSASFNKQKHQNGSKEN 1004
             DK+ E  EEYMA+PVFVHTKL +QD  P  F+QL KAL QYF  +SF ++  QN  +E+
Sbjct: 240  -DKLPE-HEEYMATPVFVHTKLQDQDFTPSNFVQLRKALMQYFRPSSFVRE--QNKPEEH 295

Query: 1005 TVPPTNLDDDSDPAPLKSIFIPSKSNTDSPGTQYESYYSSLWKLRDQVLSMSGPSFSRTV 1184
                       D   +K   IP K   ++P  Q+ESY S+LWKLRDQ+LSM  PSF+R V
Sbjct: 296  VSSSLVRGSQMDSNLIKFYAIPLKKKDENPSAQHESYVSALWKLRDQILSMKSPSFTRPV 355

Query: 1185 SERDWLKNSSKIWELVKN 1238
            SER+WLKNS+KIWE VKN
Sbjct: 356  SEREWLKNSAKIWEQVKN 373


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  241 bits (616), Expect(2) = e-116
 Identities = 121/180 (67%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
 Frame = +2

Query: 80  QAPKILLAKP-ALVTAAKYNRXXXXXXXXXXXDDASSSLRTRLPSVGFLNLLSDSWDFHT 256
           QAPKILLAKP  LVT+                       R+RLPS+  LNLLSDSWDFH 
Sbjct: 10  QAPKILLAKPPGLVTSGPAVSAAAAKFGREDETAPHHHHRSRLPSITSLNLLSDSWDFHI 69

Query: 257 DRFLPFLTDNTDFTVIGVIGPAGVGKSTIMNEIYGFDATSPGMLPPFAIESVETKVMAKH 436
           DRFLPFLT+NTDFTV+G+IGP GVGKSTI+NE+YGFD TSPGMLPPF ++S + + MA+H
Sbjct: 70  DRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFDGTSPGMLPPFTVQSEDNRAMARH 129

Query: 437 CTVGIEPRITSERIILLDTQPVYSPSVLAEMIRPDGSSTISVLGGESLPAELAHELMSIQ 616
           C+VGIEPRI++ER+ILLDTQPV+SPSVLAEM+RPDGSSTISVL GE+L  ELAHEL +IQ
Sbjct: 130 CSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLSGENLSTELAHELTAIQ 189



 Score =  205 bits (522), Expect(2) = e-116
 Identities = 110/200 (55%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
 Frame = +3

Query: 645  LGVLLTSICHIVLVVSEGVHDNNMWRLMATVDLLKHXXXXXXXXXXXXXXXXXXGSDKEI 824
            LGVLL SICH++LVVS+GV+D++M  LM TVDLLKH                  G++KE 
Sbjct: 190  LGVLLASICHVLLVVSDGVYDDSMRHLMLTVDLLKHGIPDPSSLNSAYLQSSNAGTEKEN 249

Query: 825  KDKIQEVGEEYMASPVFVHTKLHEQDIAPHYFLQLNKALNQYFSSASFNKQKHQNGSKEN 1004
            KDK+ E  EEYMA+P+FVHTKL ++D  P  F++L K L QYFSS+SF K+K  +  KE 
Sbjct: 250  KDKVSEA-EEYMATPLFVHTKLQDKDFTPCNFVELRKELAQYFSSSSFIKEKGGSMEKEQ 308

Query: 1005 ---TVPPTNLDDDSDPAPLKSIFIPSKSNTDSPGTQYESYYSSLWKLRDQVLSMSGPSFS 1175
               +VP  + D+D D   +    IP K   DS   QY+SY S+LWKLRDQVLSM+G SF+
Sbjct: 309  ISYSVPSNSHDNDPDSKSINLFVIPLKDKDDSLKAQYKSYISALWKLRDQVLSMNGLSFA 368

Query: 1176 RTVSERDWLKNSSKIWELVK 1235
            RTVSERDWLKNS+KIWELVK
Sbjct: 369  RTVSERDWLKNSAKIWELVK 388


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  252 bits (643), Expect(2) = e-114
 Identities = 131/182 (71%), Positives = 148/182 (81%), Gaps = 4/182 (2%)
 Frame = +2

Query: 83  APKILLAKPALVT----AAKYNRXXXXXXXXXXXDDASSSLRTRLPSVGFLNLLSDSWDF 250
           +PKILLAKP LVT    A K+ R           DD S+ LR+RLPS   LNLLSDSWDF
Sbjct: 7   SPKILLAKPGLVTGGPVAGKFGRGGGG-------DDDSTQLRSRLPSAASLNLLSDSWDF 59

Query: 251 HTDRFLPFLTDNTDFTVIGVIGPAGVGKSTIMNEIYGFDATSPGMLPPFAIESVETKVMA 430
             DRFLPFLT+NTDFTVIGVIG  GVGKSTIMNEIYGFD+TSPGMLPPFAI+S ET+ MA
Sbjct: 60  RIDRFLPFLTENTDFTVIGVIGSPGVGKSTIMNEIYGFDSTSPGMLPPFAIQSEETRAMA 119

Query: 431 KHCTVGIEPRITSERIILLDTQPVYSPSVLAEMIRPDGSSTISVLGGESLPAELAHELMS 610
           +HC+ GIEPRI++ERIILLDTQPV+S SVL+EM+RPDGSSTISVL GE+L AELAHEL+ 
Sbjct: 120 RHCSTGIEPRISTERIILLDTQPVFSASVLSEMMRPDGSSTISVLSGETLSAELAHELLG 179

Query: 611 IQ 616
           IQ
Sbjct: 180 IQ 181



 Score =  186 bits (473), Expect(2) = e-114
 Identities = 102/198 (51%), Positives = 125/198 (63%)
 Frame = +3

Query: 645  LGVLLTSICHIVLVVSEGVHDNNMWRLMATVDLLKHXXXXXXXXXXXXXXXXXXGSDKEI 824
            L VLL SICHIVLVVSEG+HD++MW LM TVDLLKH                   S    
Sbjct: 182  LAVLLASICHIVLVVSEGIHDDSMWHLMLTVDLLKHGISDPSLMTSLSQS----SSSGLE 237

Query: 825  KDKIQEVGEEYMASPVFVHTKLHEQDIAPHYFLQLNKALNQYFSSASFNKQKHQNGSKEN 1004
            KDK+ E  EEYMA+PVFVHTKL +QD  P   +QL KAL QYF  + F ++  +N  +E+
Sbjct: 238  KDKLPE-HEEYMATPVFVHTKLQDQDFTPSNSVQLRKALMQYFRPSYFVREHTENKPEEH 296

Query: 1005 TVPPTNLDDDSDPAPLKSIFIPSKSNTDSPGTQYESYYSSLWKLRDQVLSMSGPSFSRTV 1184
                       D   +K   IP K   ++P  Q+ESY S+LWKLRDQ+LSM  PSF+R V
Sbjct: 297  VSSSPVHGSQMDSNMIKFYAIPLKKKDENPRAQHESYVSALWKLRDQILSMKSPSFTRPV 356

Query: 1185 SERDWLKNSSKIWELVKN 1238
            SER+WLKNS+KIWELVK+
Sbjct: 357  SEREWLKNSAKIWELVKS 374


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  246 bits (629), Expect(2) = e-113
 Identities = 123/177 (69%), Positives = 143/177 (80%)
 Frame = +2

Query: 86  PKILLAKPALVTAAKYNRXXXXXXXXXXXDDASSSLRTRLPSVGFLNLLSDSWDFHTDRF 265
           PKILLAKP LV     N            DD  +S+R+RLPS+G LNLLSDSWD H DRF
Sbjct: 20  PKILLAKPGLVPGGPINSKIGRGAGA---DDEPASIRSRLPSLGSLNLLSDSWDLHIDRF 76

Query: 266 LPFLTDNTDFTVIGVIGPAGVGKSTIMNEIYGFDATSPGMLPPFAIESVETKVMAKHCTV 445
           LPFLT+NT+F V+G+IGP GVGKSTIMNEIYG+D +SPGMLPPF I S + + MA+HCT+
Sbjct: 77  LPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMARHCTL 136

Query: 446 GIEPRITSERIILLDTQPVYSPSVLAEMIRPDGSSTISVLGGESLPAELAHELMSIQ 616
           GIEPRI+SERIILLDTQPV+SPSVLAE++RPDGSST+SV+ GES  AELAHELMSIQ
Sbjct: 137 GIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGESPSAELAHELMSIQ 193



 Score =  188 bits (477), Expect(2) = e-113
 Identities = 104/203 (51%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
 Frame = +3

Query: 645  LGVLLTSICHIVLVVSEGVHDNNMWRLMATVDLLKHXXXXXXXXXXXXXXXXXXGSDKEI 824
            LG+LL SIC+IVLV+SEGVHD NMW LM TVDLLKH                   S+KE 
Sbjct: 194  LGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISSHAQNSNVASEKEY 253

Query: 825  KDKIQEVGEEYMASPVFVHTKLHEQDIAPHYFLQLNKALNQYFSSASFNKQKHQNGSKE- 1001
            K+K     EEYMA+P+FVH K+ ++D+ P   LQL +A   YF ++SF   K +    E 
Sbjct: 254  KEKTS-TSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTSSFMGDKFEKVHSEQ 312

Query: 1002 ---NTVPPT-NLDDDSDPAPLKSIFIPSKSNTDSPGTQYESYYSSLWKLRDQVLSMSGPS 1169
               + VP T NLD D +   L  + IP+++  DS   QYES+  +LWKLRDQVLSM+G S
Sbjct: 313  LLSSVVPDTRNLDVDGEDRRL--LLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMNGAS 370

Query: 1170 FSRTVSERDWLKNSSKIWELVKN 1238
            F RTVSERDWLKNS KIWE VK+
Sbjct: 371  FPRTVSERDWLKNSVKIWESVKS 393


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