BLASTX nr result

ID: Atractylodes21_contig00018667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018667
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265576.2| PREDICTED: phosphoribosylglycinamide formylt...   121   8e-26
emb|CBI25880.3| unnamed protein product [Vitis vinifera]              121   8e-26
ref|XP_002264133.2| PREDICTED: phosphoribosylglycinamide formylt...   120   1e-25
gb|AAR06583.1| glycinamide ribonucleotide transformylase [Solanu...   109   3e-22
ref|XP_002334132.1| glycinamide ribonucleotide transformylase [P...   100   1e-19

>ref|XP_002265576.2| PREDICTED: phosphoribosylglycinamide formyltransferase,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  121 bits (303), Expect = 8e-26
 Identities = 72/145 (49%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
 Frame = +2

Query: 137 LFGVCSNSLFSSIHNHKNTISL---PSLNSARLLFSLHLKSQSWVSLKPH--DLPPFVVS 301
           L G CSNS    I N K    +   PSL+           S+ W S K H  D P  V  
Sbjct: 7   LHGFCSNSAIPPIQNPKKPFFMIFNPSLDH----------SKRWASFKTHHYDAPQTVSW 56

Query: 302 NKRVFKCLNSEERIETSDDEGETLKNGVRSKNLAVFVSGGGSNFRAIHEAILRGEVHGRF 481
           +KR  +C NS E         + L++G+R KNLAVFVSGGGSNFR+IHEA LRG VHG  
Sbjct: 57  SKRSLECRNSVENAGGFTGGEKGLESGIRRKNLAVFVSGGGSNFRSIHEACLRGSVHGDI 116

Query: 482 VVLVTNKHDCGGAQYARENGIPVII 556
           VVL TNK  CGGA+YAR  GIPVI+
Sbjct: 117 VVLATNKSGCGGAEYARGKGIPVIL 141


>emb|CBI25880.3| unnamed protein product [Vitis vinifera]
          Length = 1689

 Score =  121 bits (303), Expect = 8e-26
 Identities = 72/145 (49%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
 Frame = +2

Query: 137 LFGVCSNSLFSSIHNHKNTISL---PSLNSARLLFSLHLKSQSWVSLKPH--DLPPFVVS 301
           L G CSNS    I N K    +   PSL+           S+ W S K H  D P  V  
Sbjct: 7   LHGFCSNSAIPPIQNPKKPFFMIFNPSLDH----------SKRWASFKTHHYDAPQTVSW 56

Query: 302 NKRVFKCLNSEERIETSDDEGETLKNGVRSKNLAVFVSGGGSNFRAIHEAILRGEVHGRF 481
           +KR  +C NS E         + L++G+R KNLAVFVSGGGSNFR+IHEA LRG VHG  
Sbjct: 57  SKRSLECRNSVENAGGFTGGEKGLESGIRRKNLAVFVSGGGSNFRSIHEACLRGSVHGDI 116

Query: 482 VVLVTNKHDCGGAQYARENGIPVII 556
           VVL TNK  CGGA+YAR  GIPVI+
Sbjct: 117 VVLATNKSGCGGAEYARGKGIPVIL 141


>ref|XP_002264133.2| PREDICTED: phosphoribosylglycinamide formyltransferase,
           chloroplastic [Vitis vinifera]
           gi|296088222|emb|CBI35737.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  120 bits (302), Expect = 1e-25
 Identities = 72/145 (49%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
 Frame = +2

Query: 137 LFGVCSNSLFSSIHNHKNTISL---PSLNSARLLFSLHLKSQSWVSLKPH--DLPPFVVS 301
           L G CSNS    I N K    +   PSL+           S+ W S K H  D P  V  
Sbjct: 7   LHGFCSNSAIPPIRNPKKPFFMIFNPSLDH----------SKRWASFKTHHYDAPQTVSW 56

Query: 302 NKRVFKCLNSEERIETSDDEGETLKNGVRSKNLAVFVSGGGSNFRAIHEAILRGEVHGRF 481
           +KR  +C NS E         + L++G+R KNLAVFVSGGGSNFR+IHEA LRG VHG  
Sbjct: 57  SKRRLECRNSVENAGGFTGGEKGLESGIRRKNLAVFVSGGGSNFRSIHEACLRGSVHGDI 116

Query: 482 VVLVTNKHDCGGAQYARENGIPVII 556
           VVL TNK  CGGA+YAR  GIPVI+
Sbjct: 117 VVLATNKSGCGGAEYARGKGIPVIL 141


>gb|AAR06583.1| glycinamide ribonucleotide transformylase [Solanum tuberosum]
          Length = 305

 Score =  109 bits (273), Expect = 3e-22
 Identities = 70/144 (48%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
 Frame = +2

Query: 140 FGVCSNSLFSSIHNHKNTISLPSLNSARLLFSLHLKSQSWVSLKPH-DLPPFVVSNKRVF 316
           FG+ S    S I N KN      L  +    +L LK    V LKPH    P    +K  F
Sbjct: 8   FGLSSTLPTSPIQNQKNPFFQILLKPSSSSNNLTLKG---VFLKPHVSFSPKSFPSKEFF 64

Query: 317 KCLNSEERIE----TSDDEGETLKNGVRSKNLAVFVSGGGSNFRAIHEAILRGEVHGRFV 484
           +C N  +R E    T  D G  +   +R K LAVFVSGGGSNFR+I+EA L G VHG   
Sbjct: 65  QCRNCLQRTEREATTVPDSG--VNKELRKKKLAVFVSGGGSNFRSIYEATLEGTVHGEVA 122

Query: 485 VLVTNKHDCGGAQYARENGIPVII 556
           VLVTNK+DCGGA+YARE GIPVI+
Sbjct: 123 VLVTNKNDCGGAKYAREQGIPVIL 146


>ref|XP_002334132.1| glycinamide ribonucleotide transformylase [Populus trichocarpa]
           gi|222869679|gb|EEF06810.1| glycinamide ribonucleotide
           transformylase [Populus trichocarpa]
          Length = 302

 Score =  100 bits (250), Expect = 1e-19
 Identities = 58/120 (48%), Positives = 75/120 (62%)
 Frame = +2

Query: 197 SLPSLNSARLLFSLHLKSQSWVSLKPHDLPPFVVSNKRVFKCLNSEERIETSDDEGETLK 376
           SLPS  S   L    L+S + VS K H  P F  S K++F C+N+ E     + + +   
Sbjct: 29  SLPSNPSFHSL----LQSHNCVSFKTHYSPCFKGSLKKIFFCVNASENAVLEEKDYKR-P 83

Query: 377 NGVRSKNLAVFVSGGGSNFRAIHEAILRGEVHGRFVVLVTNKHDCGGAQYARENGIPVII 556
             V+ K LAVFVSGGGSNF++IH+A   G VHG  VVLVTNK DCGGA+YA+   IPV++
Sbjct: 84  QVVKRKKLAVFVSGGGSNFKSIHDACFEGLVHGDIVVLVTNKPDCGGAEYAKNKEIPVVL 143


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