BLASTX nr result

ID: Atractylodes21_contig00018593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018593
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285704.2| PREDICTED: transcription initiation factor T...   142   4e-32
emb|CBI16511.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002299114.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ABA81879.1| unknown [Solanum tuberosum]                            134   8e-30
ref|XP_002304864.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>ref|XP_002285704.2| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Vitis vinifera]
          Length = 205

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%)
 Frame = +3

Query: 3   RVPPSVAERIDRXXXXXXXXXXXXXXXXXXXXXGRNGTFVIGDERFPASLLDLPCIVESY 182
           RVPPS+AERI+R                     GR+GTFVIG++ FPASLLDLPC++ESY
Sbjct: 17  RVPPSIAERIERLLNENSSSSEDKSLDLSFSEDGRSGTFVIGNDHFPASLLDLPCVLESY 76

Query: 183 KTYDDSVLIKTADVGQMIMVREEGDLAPDVVEYRHGLTPP 302
           KTYDDSVLIKTAD+GQMIMVREEGD APDVVEYRHGLTPP
Sbjct: 77  KTYDDSVLIKTADIGQMIMVREEGDTAPDVVEYRHGLTPP 116


>emb|CBI16511.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/100 (69%), Positives = 77/100 (77%)
 Frame = +3

Query: 3   RVPPSVAERIDRXXXXXXXXXXXXXXXXXXXXXGRNGTFVIGDERFPASLLDLPCIVESY 182
           RVPPS+AERI+R                     GR+GTFVIG++ FPASLLDLPC++ESY
Sbjct: 8   RVPPSIAERIERLLNENSSSSEDKSLDLSFSEDGRSGTFVIGNDHFPASLLDLPCVLESY 67

Query: 183 KTYDDSVLIKTADVGQMIMVREEGDLAPDVVEYRHGLTPP 302
           KTYDDSVLIKTAD+GQMIMVREEGD APDVVEYRHGLTPP
Sbjct: 68  KTYDDSVLIKTADIGQMIMVREEGDTAPDVVEYRHGLTPP 107


>ref|XP_002299114.1| predicted protein [Populus trichocarpa] gi|222846372|gb|EEE83919.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/100 (65%), Positives = 73/100 (73%)
 Frame = +3

Query: 3   RVPPSVAERIDRXXXXXXXXXXXXXXXXXXXXXGRNGTFVIGDERFPASLLDLPCIVESY 182
           RVPPS+AE++DR                     GR+GTFVIGDE FPASLLDLPC VESY
Sbjct: 8   RVPPSIAEKLDRLLSETASSSEEQSLDLSFSEDGRSGTFVIGDEHFPASLLDLPCAVESY 67

Query: 183 KTYDDSVLIKTADVGQMIMVREEGDLAPDVVEYRHGLTPP 302
           KTYDD  L+KT+D+GQM+MVRE GD APDVVEYRHGLTPP
Sbjct: 68  KTYDDCALVKTSDIGQMLMVREAGDTAPDVVEYRHGLTPP 107


>gb|ABA81879.1| unknown [Solanum tuberosum]
          Length = 197

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/100 (69%), Positives = 75/100 (75%)
 Frame = +3

Query: 3   RVPPSVAERIDRXXXXXXXXXXXXXXXXXXXXXGRNGTFVIGDERFPASLLDLPCIVESY 182
           RVPPSVAERIDR                     G+ G+FVIGDE FPASLL+LPCIVESY
Sbjct: 8   RVPPSVAERIDRLLSENSSSEDKLDLSFSED--GKTGSFVIGDEHFPASLLNLPCIVESY 65

Query: 183 KTYDDSVLIKTADVGQMIMVREEGDLAPDVVEYRHGLTPP 302
           KTYDD+VLIK+AD+GQMIMVREEGD  PDVVEYRHGLTPP
Sbjct: 66  KTYDDNVLIKSADIGQMIMVREEGDPVPDVVEYRHGLTPP 105


>ref|XP_002304864.1| predicted protein [Populus trichocarpa] gi|222842296|gb|EEE79843.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/100 (64%), Positives = 71/100 (71%)
 Frame = +3

Query: 3   RVPPSVAERIDRXXXXXXXXXXXXXXXXXXXXXGRNGTFVIGDERFPASLLDLPCIVESY 182
           RV PS+AE++DR                     GR GTFVIG+E FPASLLDLPC+VESY
Sbjct: 8   RVTPSIAEKLDRLLSDTASSSEEQSLDLSFSEDGRGGTFVIGNEHFPASLLDLPCVVESY 67

Query: 183 KTYDDSVLIKTADVGQMIMVREEGDLAPDVVEYRHGLTPP 302
           KTYDD  L+KTAD+GQMIMVRE GD  PDVVEYRHGLTPP
Sbjct: 68  KTYDDCALVKTADIGQMIMVREAGDTVPDVVEYRHGLTPP 107


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