BLASTX nr result

ID: Atractylodes21_contig00018554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018554
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    86   4e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    82   3e-14
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    73   2e-11
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    71   1e-10
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    70   2e-10

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = +1

Query: 4    AYKLNLLESA*IHPVFHSSQLKRMIGQQPVSPTIPSILNEALEWEGKPEALLDVRTVTRK 183
            AYKL L  S+ IHPVFH S LK+++G  PV PTIP  ++  +E   +PE LLDVR + + 
Sbjct: 1495 AYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQG 1554

Query: 184  EGVQTEVLLKWQEWPVEEATWEDMN 258
            +   TE L+KW+  P  EATWEDM+
Sbjct: 1555 KQTFTECLIKWKGLPAFEATWEDMS 1579


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/84 (50%), Positives = 54/84 (64%)
 Frame = +1

Query: 1    VAYKLNLLESA*IHPVFHSSQLKRMIGQQPVSPTIPSILNEALEWEGKPEALLDVRTVTR 180
            VAY+L L   A +HPVFH SQLK+ +G    SPTIP  L   L  + +PE+LL++R+  +
Sbjct: 1427 VAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQ 1486

Query: 181  KEGVQTEVLLKWQEWPVEEATWED 252
            K    TEVL+KW   P  EATWED
Sbjct: 1487 KPAEVTEVLIKWLNLPAFEATWED 1510


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/87 (45%), Positives = 49/87 (56%)
 Frame = +1

Query: 1    VAYKLNLLESA*IHPVFHSSQLKRMIGQQPVSPTIPSILNEALEWEGKPEALLDVRTVTR 180
            VAYKL L E + IHPVFH SQLKR +        +P IL+  LEW   PE LLD+R    
Sbjct: 1520 VAYKLQLPEHSTIHPVFHVSQLKRAVPPSFTPQELPKILSPTLEWNTGPEKLLDIRQSNT 1579

Query: 181  KEGVQTEVLLKWQEWPVEEATWEDMNT 261
              G   EVL++W      E+TWE + T
Sbjct: 1580 NSG--PEVLVQWSGLSTLESTWEPLLT 1604


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/85 (37%), Positives = 50/85 (58%)
 Frame = +1

Query: 1    VAYKLNLLESA*IHPVFHSSQLKRMIGQQPVSPTIPSILNEALEWEGKPEALLDVRTVTR 180
            VAY+L+L   + IHPVFH SQL++ +G  PV P +P +L   L     P  +L +R    
Sbjct: 1263 VAYELDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPL 1322

Query: 181  KEGVQTEVLLKWQEWPVEEATWEDM 255
             +    E+L++W +   +EATWE++
Sbjct: 1323 NQAAPAEILVQWSDMSADEATWENV 1347


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1    VAYKLNLLESA*IHPVFHSSQLKRMIGQQ-PVSPTIPSILNEALEWEGKPEALLDVRTVT 177
            VAYKL L ES+ IHPVFH SQL++M+G    + P   + LNE  EW   PE +       
Sbjct: 2342 VAYKLQLPESSCIHPVFHVSQLRKMVGNHIMLKPEEMACLNENYEWLAIPEEIYGYS--K 2399

Query: 178  RKEGVQTEVLLKWQEWPVEEATWED 252
             KEG+  EVL+KWQ  P ++A+WE+
Sbjct: 2400 NKEGM-WEVLIKWQGLPPQDASWEE 2423


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