BLASTX nr result

ID: Atractylodes21_contig00018532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018532
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22162.3| unnamed protein product [Vitis vinifera]              133   2e-29
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   129   5e-28
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   128   1e-27
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   123   2e-26
ref|XP_002517477.1| conserved hypothetical protein [Ricinus comm...   111   1e-22

>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  133 bits (335), Expect = 2e-29
 Identities = 67/120 (55%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
 Frame = +3

Query: 282 DSTTKVTDMDMDSLVHCTNHLTLQDLSNMAISCKFLNRLVSSDSIWRRLFREQWPQQEPY 461
           +++T +TD+D DSL  C  +L LQDLSNMA+SCKFL  +  SDSIW+R F E WP Q P 
Sbjct: 2   ETSTTITDLDADSLAECGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPS 61

Query: 462 TISQTSGIREAYMARYNALRQFKFVDPLVCDVYIGAKSSG--LLFSKKSVIFSQGPLIQI 635
           T SQ SG+RE+Y+AR  ALRQFKFVDPL    +  AK     LL     +IFSQG +IQI
Sbjct: 62  TFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQI 121


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  129 bits (324), Expect = 5e-28
 Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
 Frame = +3

Query: 282 DSTTKVTDMDMDSLVHCTNHLTLQDLSNMAISCKFLNRLVSSDSIWRRLFREQWPQQEPY 461
           +++T +TD+D DSL     +L LQDLSNMA+SCKFL  +  SDSIW+R F E WP Q P 
Sbjct: 2   ETSTTITDLDADSLAEYGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPS 61

Query: 462 TISQTSGIREAYMARYNALRQFKFVDPLVCDVYIGAKSSG--LLFSKKSVIFSQGPLIQI 635
           T SQ SG+RE+Y+AR  ALRQFKFVDPL    +  AK     LL     +IFSQG +IQI
Sbjct: 62  TFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQI 121


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  128 bits (321), Expect = 1e-27
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
 Frame = +3

Query: 282 DSTTKVTDMDMDSLVHCTNHLTLQDLSNMAISCKFLNRLVSSDSIWRRLFREQWPQQEPY 461
           +++T +TD+D DSL  C  +L LQDLSNMA+SCKFL  +  SDSIW+R F E WP Q P 
Sbjct: 2   ETSTTITDLDADSLAECGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPS 61

Query: 462 TISQTSGIREAYMARYNALRQFKFVDPLVCDVYIGAKSSG--LLFSKKSVIFSQ---GPL 626
           T SQ SG+RE+Y+AR  ALRQFKFVDPL    +  AK     LL     +IFSQ   G +
Sbjct: 62  TFSQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQVYRGSV 121

Query: 627 IQI 635
           IQI
Sbjct: 122 IQI 124


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
 Frame = +3

Query: 270 PSTHDSTTKVTDMDMDSLVHCTNHLTLQDLSNMAISCKFLNRLVSSDSIWRRLFREQWPQ 449
           PS+  +TT++TD++ DSL HC  +L+LQDLSN+A +CK L R+  SD IW+  FRE WP+
Sbjct: 5   PSSTATTTRITDLNEDSLAHCATYLSLQDLSNLATTCKSLKRVAYSDPIWQHCFREHWPR 64

Query: 450 QEPYTISQTSGIREAYMARYNALRQFKFVDPLVCDVYI-GAKS-SGLLFSKKSVIFSQG 620
           +    + QTSG+REAY+ R  A++QFKFVDPLV D+YI GAK    ++  K  + FSQG
Sbjct: 65  E----LLQTSGLREAYLKRRVAVQQFKFVDPLVADLYITGAKPFDHIILDKNDISFSQG 119


>ref|XP_002517477.1| conserved hypothetical protein [Ricinus communis]
           gi|223543488|gb|EEF45019.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  111 bits (278), Expect = 1e-22
 Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = +3

Query: 285 STTKVTDMDMDSLVHCTNHLTLQDLSNMAISCKFLNRLVSSDSIWRRLFREQWPQQEPYT 464
           +TTK+TD++ DSL HC N+L+LQDLSN+AI+CK L R+  SDSIW R +RE+WP + P  
Sbjct: 4   TTTKLTDLNEDSLAHCANYLSLQDLSNLAITCKCLKRVAYSDSIWHRCYRERWPLEVP-- 61

Query: 465 ISQTSGIREAYMARYNALRQFKFVDPLVCDVYIGAKS--SGLLFSKKSVIFSQGPLIQI 635
                 +REAY  R  +L QFK  DPL  D+Y         ++     +IFSQG  +QI
Sbjct: 62  -GGLLSLREAYSERLASLHQFKCTDPLCADLYTNDSKPFDHVMLDNNDIIFSQGSSVQI 119


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