BLASTX nr result

ID: Atractylodes21_contig00018472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018472
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001766402.1| predicted protein [Physcomitrella patens sub...   164   1e-38
gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   164   2e-38
ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E...   163   2e-38
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...   162   4e-38
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   162   5e-38

>ref|XP_001766402.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168048491|ref|XP_001776700.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162671992|gb|EDQ58536.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|162682311|gb|EDQ68730.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 87

 Score =  164 bits (416), Expect = 1e-38
 Identities = 82/87 (94%), Positives = 86/87 (98%)
 Frame = +1

Query: 109 MATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVS 288
           MATKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRIIGFDEYMNLVLD+AEEVS
Sbjct: 1   MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVS 60

Query: 289 IKKKTRRALGRILLKGDNITLMMNTGK 369
           +KKKTR+ LGRILLKGDNITLMMNTGK
Sbjct: 61  LKKKTRKPLGRILLKGDNITLMMNTGK 87


>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  164 bits (414), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 86/86 (100%)
 Frame = +1

Query: 112 ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI 291
           +TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVLDDAEEV+I
Sbjct: 3   STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEVNI 62

Query: 292 KKKTRRALGRILLKGDNITLMMNTGK 369
           KKKTR++LGRILLKGDNITLMMNTGK
Sbjct: 63  KKKTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
           gi|255628153|gb|ACU14421.1| unknown [Glycine max]
          Length = 88

 Score =  163 bits (413), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = +1

Query: 112 ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI 291
           +TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI
Sbjct: 3   STKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI 62

Query: 292 KKKTRRALGRILLKGDNITLMMNTGK 369
           KKK+R+ LGRILLKGDNITLMMNTGK
Sbjct: 63  KKKSRKTLGRILLKGDNITLMMNTGK 88


>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score =  162 bits (411), Expect = 4e-38
 Identities = 80/86 (93%), Positives = 86/86 (100%)
 Frame = +1

Query: 112 ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI 291
           +TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV++
Sbjct: 3   STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNV 62

Query: 292 KKKTRRALGRILLKGDNITLMMNTGK 369
           KKKTR++LGRILLKGDNITLMMN+GK
Sbjct: 63  KKKTRKSLGRILLKGDNITLMMNSGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  162 bits (410), Expect = 5e-38
 Identities = 80/86 (93%), Positives = 85/86 (98%)
 Frame = +1

Query: 112 ATKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSI 291
           +TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV+I
Sbjct: 3   STKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNI 62

Query: 292 KKKTRRALGRILLKGDNITLMMNTGK 369
           KKK+R+ LGRILLKGDNITLMMNTGK
Sbjct: 63  KKKSRKTLGRILLKGDNITLMMNTGK 88


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