BLASTX nr result

ID: Atractylodes21_contig00018441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018441
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   192   7e-47
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    187   3e-45
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              185   8e-45
gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]          184   2e-44
ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...   183   4e-44

>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  192 bits (488), Expect = 7e-47
 Identities = 94/172 (54%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
 Frame = +1

Query: 34  GRSNGSSKWATAVALAFCATLMVMLPQVSAKRFIVGGSMGWTSNVNYTLWAGNQTFYLGD 213
           G   GS        L F   ++VM+P+VSA R+ VG +MGWTSNVNYT+WA  + FY GD
Sbjct: 4   GSGFGSPMMVALAVLVFA--MVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGD 61

Query: 214 WLFFVYDRNQNDVLEVNKTNYDTCNAEHPVHNYTTGAGRDVVALNVTHDRYFISSKGSCY 393
           WLFFVYDRNQ ++LEVNKT+Y++CN++HP+HN+T GAGRDVV LNVT + YFIS KG CY
Sbjct: 62  WLFFVYDRNQMNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCY 121

Query: 394 GGMKLHVHLTXXXXXXXXXXXKSHS-SRFGVLRSQLVIPTVVAIAAIWDSLL 546
           GGMKL VH+               S S   + RSQ V+PTV AI A+WD+ +
Sbjct: 122 GGMKLAVHVENPPPPPTASPLDEKSGSPSSIFRSQYVLPTVFAIGALWDAFV 173


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  187 bits (474), Expect = 3e-45
 Identities = 87/160 (54%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
 Frame = +1

Query: 70  VALAFCATLMVMLPQVSAKRFIVGGSMGWTSNVNYTLWAGNQTFYLGDWLFFVYDRNQND 249
           +A+     +++MLP VSA R+ VGG+ GW++NVNYT+WA ++ FY GDWLFFVYDRNQ +
Sbjct: 8   LAVVLMCAVVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMN 67

Query: 250 VLEVNKTNYDTCNAEHPVHNYTTGAGRDVVALNVTHDRYFISSKGSCYGGMKLHVHLTXX 429
           VLEVN+TNY++CN++HP+HN+TTGAGRDVV LNVT   YF+S KG CY GMK+ +++   
Sbjct: 68  VLEVNETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENP 127

Query: 430 XXXXXXXXXK-SHSSRFGVLRSQLVIPTVVAIAAIWDSLL 546
                    K S+ S     R Q+V+P V AIAA+WDS L
Sbjct: 128 PPPPSASPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFL 167


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  185 bits (470), Expect = 8e-45
 Identities = 88/155 (56%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
 Frame = +1

Query: 85  CATLMVMLPQVSAKRFIVGGSMGWTSNVNYTLWAGNQTFYLGDWLFFVYDRNQNDVLEVN 264
           CA ++ MLP VSA R+ VGG+ GW++NVNYT+WA ++ FY GDWLFFVYDRNQ +VLEVN
Sbjct: 2   CAVVL-MLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVN 60

Query: 265 KTNYDTCNAEHPVHNYTTGAGRDVVALNVTHDRYFISSKGSCYGGMKLHVHLTXXXXXXX 444
           +TNY++CN++HP+HN+TTGAGRDVV LNVT   YF+S KG CY GMK+ +++        
Sbjct: 61  ETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPS 120

Query: 445 XXXXK-SHSSRFGVLRSQLVIPTVVAIAAIWDSLL 546
               K S+ S     R Q+V+P V AIAA+WDS L
Sbjct: 121 ASPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFL 155


>gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]
          Length = 175

 Score =  184 bits (466), Expect = 2e-44
 Identities = 97/176 (55%), Positives = 120/176 (68%), Gaps = 4/176 (2%)
 Frame = +1

Query: 31  MGRSNGSSKWATAVALAFCATLMVMLPQVSAKRFIVGGS-MGWTSNVNYTLWAGNQTFYL 207
           M RS        AV LA    L++M+PQ  A R+IVGG  +GWT+NVNYT+WA  + FY 
Sbjct: 1   MERSKAMMMAVAAVGLA----LVLMVPQADATRYIVGGGGIGWTTNVNYTVWARGKHFYN 56

Query: 208 GDWLFFVYDRNQNDVLEVNKTNYDTCNAEHPVHNYTTGAGRDVVALNVTHDRYFISSKGS 387
           GDWL+FVYDRNQ +VLEVNKT+Y++CNA+HP+HN+TTGAGRDVV LNVT   YFIS KG 
Sbjct: 57  GDWLYFVYDRNQMNVLEVNKTDYESCNADHPLHNWTTGAGRDVVPLNVTRHYYFISGKGF 116

Query: 388 CYGGMKLHVHL--TXXXXXXXXXXXKSHSSRFGVL-RSQLVIPTVVAIAAIWDSLL 546
           CYGGMKL V +              KS SS   ++ R QLV+P   AIAA+WD+ +
Sbjct: 117 CYGGMKLAVRVENPPPPPKAAPLNEKSGSSPSSIVYRGQLVLPAAFAIAALWDTFV 172


>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  183 bits (464), Expect = 4e-44
 Identities = 88/161 (54%), Positives = 109/161 (67%)
 Frame = +1

Query: 64  TAVALAFCATLMVMLPQVSAKRFIVGGSMGWTSNVNYTLWAGNQTFYLGDWLFFVYDRNQ 243
           T V L     ++VMLP VSA RF+VGG MGW +N NYT WA  + FY GDWLFFVYDRNQ
Sbjct: 16  TMVFLLLGFAVLVMLPMVSATRFMVGGRMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQ 75

Query: 244 NDVLEVNKTNYDTCNAEHPVHNYTTGAGRDVVALNVTHDRYFISSKGSCYGGMKLHVHLT 423
            +VLEVNKT+Y+TCN++HP+HN+TTGAGRDVV LNVT   YFIS KG C+GGMKL VH+ 
Sbjct: 76  MNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKLAVHVE 135

Query: 424 XXXXXXXXXXXKSHSSRFGVLRSQLVIPTVVAIAAIWDSLL 546
                      ++ ++         ++P V AI A WDS +
Sbjct: 136 NLPPPPKAAPERAAATFLSSKGQIFLMPIVFAIGAAWDSFI 176


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