BLASTX nr result

ID: Atractylodes21_contig00018424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018424
         (1766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   356   1e-95
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              348   3e-93
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   294   4e-77
ref|XP_002514479.1| nucleic acid binding protein, putative [Rici...   283   8e-74
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   273   1e-70

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  356 bits (914), Expect = 1e-95
 Identities = 197/375 (52%), Positives = 236/375 (62%), Gaps = 12/375 (3%)
 Frame = +2

Query: 431  MPPRKEPCRNFQRGFCQYGERCKFLHVNQQQAKPNPFGFGTQ---NAPHTDSQSQKPNPF 601
            M  +KEPCRNFQRG CQYGERCKFLHV QQQ KPN  GFG Q   N  HT+ Q Q+ NPF
Sbjct: 1    MNRKKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPF 60

Query: 602  GFGVQNNSHIGSKPNQFKPGENKWSRFSPINAGNSSTPQKQ-DNQSSAPNHVCTDSESCK 778
            GFGVQ+NS         KP ENKW+RFSP+  G+SS+  +Q DNQ    NH CTD ESCK
Sbjct: 61   GFGVQSNSLP-------KPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCK 113

Query: 779  RQIHEDFEQEKPLWKLTCYGHCKYGTCDIVGDISCEELRAAAYDDAKRGMNIQSIVEKER 958
            RQI EDFE E+P+WKLTCYGHCK   CDIVGDIS EELR AAYDDA RG+++QSIVE+ER
Sbjct: 114  RQIVEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERER 173

Query: 959  SLLSSKLIEFENLLRNPYTPPQNSTLTTQSAFPG-SSSNVSPQINVPPSVSSFSQLGSTI 1135
            SLL+SKLIEF++LLR PY  P NSTL  QS  P   +S+++ Q N PPS SSFSQL ++ 
Sbjct: 174  SLLNSKLIEFDSLLRKPYAAPPNSTLAIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSP 233

Query: 1136 NAGFQMRPAAPS-IPFGQVNQFQAPTRISNVSQTNSFAFGNPGPLGSQPSTQXXXXXXXX 1312
            N GF  RP+ PS   FGQ N  Q  ++ S    TN+ AFGN G  GSQ   Q        
Sbjct: 234  NMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPS 293

Query: 1313 XXXXXG----NADRSGFSTAAISTN-LDLGRQQSSMPFGGHNPSANAVSSVQ-MTQNIPM 1474
                      +A    FS  A S   +     QS +   G N   +A S++    + +  
Sbjct: 294  NTAGFSHNNMSAGSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQR 353

Query: 1475 SNSNGDNSMWFKDEW 1519
             N +GD S+W K+EW
Sbjct: 354  DNFSGDMSIWLKEEW 368


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  348 bits (892), Expect = 3e-93
 Identities = 193/375 (51%), Positives = 231/375 (61%), Gaps = 18/375 (4%)
 Frame = +2

Query: 449  PCRNFQRGFCQYGERCKFLHVNQQQAKPNPFGFGTQ---NAPHTDSQSQKPNPFGFGVQN 619
            P    Q   CQYGERCKFLHV QQQ KPN  GFG Q   N  HT+ Q Q+ NPFGFGVQ+
Sbjct: 5    PVIRIQLNICQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQS 64

Query: 620  NS------HIGSKPNQFKPGENKWSRFSPINAGNSSTPQKQ-DNQSSAPNHVCTDSESCK 778
            NS        GSK N FKP ENKW+RFSP+  G+SS+  +Q DNQ    NH CTD ESCK
Sbjct: 65   NSLPKGTSDFGSKQNHFKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCK 124

Query: 779  RQIHEDFEQEKPLWKLTCYGHCKYGTCDIVGDISCEELRAAAYDDAKRGMNIQSIVEKER 958
            RQI EDFE E+P+WKLTCYGHCK   CDIVGDIS EELR AAYDDA RG+++QSIVE+ER
Sbjct: 125  RQIVEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERER 184

Query: 959  SLLSSKLIEFENLLRNPYTPPQNSTLTTQSAFPG-SSSNVSPQINVPPSVSSFSQLGSTI 1135
            SLL+SKLIEF++LLR PY  P NSTL  QS  P   +S+++ Q N PPS SSFSQL ++ 
Sbjct: 185  SLLNSKLIEFDSLLRKPYAAPPNSTLAIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSP 244

Query: 1136 NAGFQMRPAAPS-IPFGQVNQFQAPTRISNVSQTNSFAFGNPGPLGSQPSTQXXXXXXXX 1312
            N GF  RP+ PS   FGQ N  Q  ++ S    TN+ AFGN G  GSQ   Q        
Sbjct: 245  NMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPS 304

Query: 1313 XXXXXG----NADRSGFSTAAISTN-LDLGRQQSSMPFGGHNPSANAVSSVQ-MTQNIPM 1474
                      +A    FS  A S   +     QS +   G N   +A S++    + +  
Sbjct: 305  NTAGFSHNNMSAGSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQR 364

Query: 1475 SNSNGDNSMWFKDEW 1519
             N +GD S+W K+EW
Sbjct: 365  DNFSGDMSIWLKEEW 379


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 360

 Score =  294 bits (753), Expect = 4e-77
 Identities = 171/372 (45%), Positives = 220/372 (59%), Gaps = 12/372 (3%)
 Frame = +2

Query: 440  RKEPCRNFQRGFCQYGERCKFLHVNQQQAKPNPFGFGTQNAPHTDSQSQKPNPFGFGVQN 619
            +K+PCR+FQRG CQYGERCKFLH  QQ                  +Q QKPNPFGFGV N
Sbjct: 4    KKQPCRDFQRGTCQYGERCKFLHATQQ------------------AQQQKPNPFGFGVPN 45

Query: 620  NSH------IGSKPNQFKPGENKWSRFSPINAGNSSTPQKQDNQSSAPNHVCTDSESCKR 781
            N         GSK NQ+KP ENKW+R S   AGN+ + +K DN   + NH CTD ESCKR
Sbjct: 46   NGQSKAVADFGSKQNQYKPFENKWTRPST-PAGNAQS-RKPDNHLPSSNHKCTDGESCKR 103

Query: 782  QIHEDFEQEKPLWKLTCYGHCKYGTCDIVGDISCEELRAAAYDDAKRGMNIQSIVEKERS 961
            QI EDF+ E+PLWKLTCYGH K   CDIVGD+S EELR  AYD+AKRG+++QSIVE+ER+
Sbjct: 104  QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 163

Query: 962  LLSSKLIEFENLLRNPYTPPQNSTLTTQSAFPGSSS-NVSPQI-NVPPSVSSFSQLGSTI 1135
            LL+SKL EFE LL  PY  P N     QS+F G++S ++ P   N  PS+SSFSQLG+++
Sbjct: 164  LLNSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNNTPSLSSFSQLGASL 223

Query: 1136 NAGFQMRPAAP-SIPFGQVNQFQAPTRISNVSQTNSFAFGNPGPLGSQPSTQXXXXXXXX 1312
            N GF  RP+ P +  FGQ  QF +P +       NS  FG    + + PST         
Sbjct: 224  NTGFGARPSNPHNTVFGQQVQFSSPVQ-------NSSGFG----MTNFPSTSVVAVGGGV 272

Query: 1313 XXXXXGN-ADRSGFSTAAISTNLDLGRQQSSMPFGGHNPSANA--VSSVQMTQNIPMSNS 1483
                 GN +  SGF      +N+      +++P    N SA+     + Q+   +   NS
Sbjct: 273  GSQTFGNFSTLSGFDIKNAGSNIFSSAALTNLPPTNANSSASGQIAPNAQLVNKLQQENS 332

Query: 1484 NGDNSMWFKDEW 1519
            + D  +W K++W
Sbjct: 333  SVDVDIWMKEKW 344


>ref|XP_002514479.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223546378|gb|EEF47879.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 282

 Score =  283 bits (725), Expect = 8e-74
 Identities = 150/245 (61%), Positives = 174/245 (71%), Gaps = 6/245 (2%)
 Frame = +2

Query: 440  RKEPCRNFQRGFCQYGERCKFLHVN--QQQAKPNPFGFGTQNAPHTDSQSQKPNPFGFGV 613
            RKE CRNFQRG CQYGERCKFLHVN  QQQ+  N FGFG+Q       Q+Q  +PFGFG 
Sbjct: 4    RKEVCRNFQRGSCQYGERCKFLHVNNQQQQSNNNSFGFGSQQK----QQNQSSSPFGFGT 59

Query: 614  QNNSHIGSKPNQFKPGENKWSRFSPI-NAGNSSTPQKQDNQSSAPNHVCTDSESCKRQIH 790
            Q+ S         KP ENKW+RFSPI NA  + + ++ DNQ    NH CTD +SCKRQI 
Sbjct: 60   QSKSST-------KPFENKWTRFSPISNAAATPSSRQPDNQPQPANHKCTDPDSCKRQIA 112

Query: 791  EDFEQEKPLWKLTCYGHCKYGTCDIVGDISCEELRAAAYDDAKRGMNIQSIVEKERSLLS 970
            EDF+ EKPLWKLTCYGH K G CDI GD+S EELRA AYD+AK G+ +QSIVE+ER+LLS
Sbjct: 113  EDFQNEKPLWKLTCYGHSKNGPCDIGGDVSYEELRALAYDEAKHGLTLQSIVERERNLLS 172

Query: 971  SKLIEFENLLRNPYTPPQNSTLTTQSAFPGSSSNV---SPQINVPPSVSSFSQLGSTINA 1141
            SKLIEFENLLRNPY  P  S   +QS FPG + N    S Q N PPSVSSFSQLG+++N 
Sbjct: 173  SKLIEFENLLRNPYAAPPKSAF-SQSPFPGVTPNAILPSGQNNPPPSVSSFSQLGASLNM 231

Query: 1142 GFQMR 1156
              + R
Sbjct: 232  ATRTR 236


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 377

 Score =  273 bits (698), Expect = 1e-70
 Identities = 160/360 (44%), Positives = 206/360 (57%), Gaps = 12/360 (3%)
 Frame = +2

Query: 476  CQYGERCKFLHVNQQQAKPNPFGFGTQNAPHTDSQSQKPNPFGFGVQNNSH------IGS 637
            CQYGERCKFLH  QQ                  +Q QKPNPFGFGV NN         GS
Sbjct: 33   CQYGERCKFLHATQQ------------------AQQQKPNPFGFGVPNNGQSKAVADFGS 74

Query: 638  KPNQFKPGENKWSRFSPINAGNSSTPQKQDNQSSAPNHVCTDSESCKRQIHEDFEQEKPL 817
            K NQ+KP ENKW+R  P     ++  +K DN   + NH CTD ESCKRQI EDF+ E+PL
Sbjct: 75   KQNQYKPFENKWTR--PSTPTGNAQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQNERPL 132

Query: 818  WKLTCYGHCKYGTCDIVGDISCEELRAAAYDDAKRGMNIQSIVEKERSLLSSKLIEFENL 997
            WKLTCYGH K   CDIVGD+S EELR  AYD+AKRG+++QSIVE+ER+LL+SKL EFE L
Sbjct: 133  WKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGL 192

Query: 998  LRNPYTPPQNSTLTTQSAFPGSSS-NVSPQI-NVPPSVSSFSQLGSTINAGFQMRPAAP- 1168
            L  PY  P N     QS+F G++S ++ P   N  PS+SSFSQLG+++N GF  RP+ P 
Sbjct: 193  LLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNNTPSLSSFSQLGASLNTGFGARPSNPH 252

Query: 1169 SIPFGQVNQFQAPTRISNVSQTNSFAFGNPGPLGSQPSTQXXXXXXXXXXXXXGN-ADRS 1345
            +  FGQ  QF +P +       NS  FG    + + PST              GN +  S
Sbjct: 253  NTVFGQQVQFSSPVQ-------NSSGFG----MTNFPSTSVVAVGGGVGSQTFGNFSTLS 301

Query: 1346 GFSTAAISTNLDLGRQQSSMPFGGHNPSANA--VSSVQMTQNIPMSNSNGDNSMWFKDEW 1519
            GF      +N+      +++P    N SA+     + Q+   +   NS+ D  +W K++W
Sbjct: 302  GFDIKNAGSNIFSSAALTNLPPTNANSSASGQIAPNAQLVNKLQPENSSVDVDIWMKEKW 361


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