BLASTX nr result

ID: Atractylodes21_contig00018367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018367
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...   194   6e-48
ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   184   6e-45
ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206...   179   3e-43
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41

>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
           gi|223531882|gb|EEF33699.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 580

 Score =  194 bits (494), Expect = 6e-48
 Identities = 117/193 (60%), Positives = 131/193 (67%), Gaps = 7/193 (3%)
 Frame = +3

Query: 6   IGARNLHTNGIHNALVTGLSSHRRSMSFT-----NTTDDFNNDLFSRNRRSPSVASSDES 170
           IGARN           TG  SHRR  S       +TT D N DLFS+NRRS SVASSDES
Sbjct: 19  IGARNFPAG-------TGSFSHRRGHSLNGFSSKDTTTDENLDLFSKNRRSLSVASSDES 71

Query: 171 -DLQVRLGRLSVGSTKPAKSVSDDLLSSNEGGKHDYDWXXXXXXXXXXXSSDGKESQPTS 347
            D+ ++LGR+SVGS K AKS  DDLLSS +GGKHDYDW           +SDG +SQPT 
Sbjct: 72  SDVSMKLGRVSVGSAKVAKSGIDDLLSSTDGGKHDYDWLLTPPGTPLFPTSDGSDSQPTL 131

Query: 348 IAPRRNSSVRSGSTIKTSRLSVSQSESSHPSRPARSCSATRSSISTTQYTNY-SNRNSNI 524
           +APR  S  RS ST K SRLSVSQSES H SRP RS S TRSSIS +QY+ Y SNR+S+I
Sbjct: 132 VAPRSRSLSRSVSTTKASRLSVSQSESQHSSRPTRSSSVTRSSISNSQYSTYSSNRSSSI 191

Query: 525 LNTSSASVSSYIR 563
           LNTSSASVSSY R
Sbjct: 192 LNTSSASVSSYTR 204


>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
           gi|147841364|emb|CAN71240.1| hypothetical protein
           VITISV_034160 [Vitis vinifera]
           gi|296085846|emb|CBI31170.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score =  184 bits (468), Expect = 6e-45
 Identities = 106/174 (60%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
 Frame = +3

Query: 51  VTGLSSHRRSMSFTNTTDDF--NNDLFSRNRRSPSVASSDESDLQVRLGRLSVGSTKPAK 224
           +  +S HRR  S T    D   N DLFSRNRR+ SV SS+ES++ ++LGRLSVGS K A+
Sbjct: 15  IPAVSHHRRGRSLTGMPRDADENLDLFSRNRRTLSVVSSEESEVPLKLGRLSVGSAKLAR 74

Query: 225 SVSDDLLSSNEGGKHDYDWXXXXXXXXXXXSSDGKESQPTSIAPRRNSSVRSGSTIKTSR 404
           S  DDLLSS EGGKHDYDW           SSDG ESQPT +APR ++  RS ST K SR
Sbjct: 75  SGMDDLLSSVEGGKHDYDWLLTPPGTPLFPSSDGNESQPTMLAPRNSNLARSASTTKASR 134

Query: 405 LSVSQSESSHPSRPARSCSATRSSISTTQYTNY-SNRNSNILNTSSASVSSYIR 563
           LSV+QSESS+ SRP RS S TR SIST+QY+ Y S+R+S+ILNTSSASVSSY R
Sbjct: 135 LSVAQSESSY-SRPTRSSSVTRPSISTSQYSTYSSSRSSSILNTSSASVSSYTR 187


>ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206216 [Cucumis sativus]
          Length = 578

 Score =  179 bits (454), Expect = 3e-43
 Identities = 106/172 (61%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
 Frame = +3

Query: 63  SSHRRSMSFTNTT--DDFNNDLFSRNRRSPSV-ASSDESDLQVRLGRLSVGSTKPAKSVS 233
           S HRR  SFT  +   D N DLFS+NRR+ SV AS D SD  V+LGRLSVGS K AKS  
Sbjct: 19  SHHRRGHSFTGISRDSDENLDLFSKNRRTLSVTASDDSSDASVKLGRLSVGSVKLAKSGI 78

Query: 234 DDLLSSNEGGKHDYDWXXXXXXXXXXXSSDGKESQPTSIAPRRNSSVRSGSTIKTSRLSV 413
           DDLLSS EGGKHDYDW           SS   E Q T  APR ++ VRS ST K SRLSV
Sbjct: 79  DDLLSSTEGGKHDYDWLLTPPGTPLFPSSSESEIQSTVAAPRSSTLVRSSSTTKASRLSV 138

Query: 414 SQSESSHPSRPARSCSATRSSISTTQYTNYSNRN--SNILNTSSASVSSYIR 563
           SQSES++PSRP RS S +RSS+ST QY++YS+    S+ILNTSSASVSSYIR
Sbjct: 139 SQSESNNPSRPVRSSSVSRSSVSTPQYSSYSSNRSASSILNTSSASVSSYIR 190


>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  178 bits (452), Expect = 5e-43
 Identities = 111/180 (61%), Positives = 123/180 (68%), Gaps = 11/180 (6%)
 Frame = +3

Query: 57  GLSSHRRSMSFT--------NTTDDFNNDLFSRNRRSPSVASSDES-DLQVRLGRLSVGS 209
           G   HRR  S T        N   D N DLFS+NRRS SVASSDES D+ V+LGRLSVGS
Sbjct: 34  GSQYHRRGHSLTGGGVFSKDNHNKDENLDLFSKNRRSLSVASSDESSDVSVKLGRLSVGS 93

Query: 210 TKPAKSVSDDLLSSNEGGKHDYDWXXXXXXXXXXXSSDGKESQPTSIAPRRNSSVRSGST 389
            K  +S  DDLLSS EGGKHDYDW           SS+G ESQPT +APR +S  RS ST
Sbjct: 94  AKLVRSGIDDLLSS-EGGKHDYDWLLTPPGTPLFPSSEGSESQPTLVAPRSSSLARSAST 152

Query: 390 IK-TSRLSVSQSESSHPSRPARSCSATRSSISTTQYTNY-SNRNSNILNTSSASVSSYIR 563
            K  S LSVSQSES H SRPARS S TR SIS++QY+ Y SNR+S+ILNTSSASVSSY R
Sbjct: 153 TKAASTLSVSQSESYHSSRPARSSSVTRPSISSSQYSTYSSNRSSSILNTSSASVSSYTR 212


>ref|XP_002309195.1| predicted protein [Populus trichocarpa] gi|222855171|gb|EEE92718.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  173 bits (438), Expect = 2e-41
 Identities = 99/162 (61%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
 Frame = +3

Query: 84  SFTNTTDDFNNDLFSRNRRSPSVASSDESDLQVRLGRLSVGSTKPAKSVSDDLLSSNEGG 263
           S  N   D N DLFS+NRR  SV+S + SD+ V+L RL+VGS K A+S  DDLLSS EGG
Sbjct: 19  SKNNNGTDENLDLFSKNRRGLSVSSDESSDVSVKLERLAVGSAKFARSGIDDLLSSTEGG 78

Query: 264 KHDYDWXXXXXXXXXXXSSDGKESQPTSIAPRRNSSVRSGSTIK-TSRLSVSQSESSHPS 440
           KHDYDW            S+G ES+PTS+APR +S  RS ST K  SRLSVSQSES H S
Sbjct: 79  KHDYDWLLTPPGTPLSPPSEGSESKPTSVAPRSSSLARSTSTTKAVSRLSVSQSESYHSS 138

Query: 441 RPARSCSATRSSISTTQYTNY-SNRNSNILNTSSASVSSYIR 563
           RP RS S TR SIS++QY+ Y SNR+S+ILNTSSASVSSY R
Sbjct: 139 RPTRSSSVTRPSISSSQYSTYSSNRSSSILNTSSASVSSYTR 180


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