BLASTX nr result

ID: Atractylodes21_contig00018354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018354
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   313   4e-83
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...   283   5e-74
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...   279   1e-72
ref|NP_001154603.1| reticulon-like protein B16 [Arabidopsis thal...   266   7e-69

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  313 bits (803), Expect = 4e-83
 Identities = 159/228 (69%), Positives = 188/228 (82%)
 Frame = +2

Query: 140 SMEDSQDVCDPVERDNNTCSTSTSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGI 319
           S ED  + C  V+ D    STS   GYRLFDR+++IHQ+MGGGKAADVLLWKRRR+S G 
Sbjct: 3   SSEDPSNAC--VDGD---ASTSGGPGYRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGT 57

Query: 320 IIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMV 499
           I+VATVAW++FERSGLSFL+ICS+VLL LIV+ FL ANYA+ R+KQ+++LPEL LSEEMV
Sbjct: 58  IVVATVAWILFERSGLSFLSICSDVLLILIVVLFLRANYAAFRNKQLKSLPELELSEEMV 117

Query: 500 NYAAASFRTKVNYLLLMAHDITLGKDFRLFFMVVGFLWLLSVLGSLISFFTLAYIGTILS 679
           N  A SFR K+NYLLLMAHDITLGKDFRLFF VV  LWLLSV+GS  SFFTLAYIGTI+S
Sbjct: 118 NSVAGSFRVKINYLLLMAHDITLGKDFRLFFKVVLGLWLLSVVGSSFSFFTLAYIGTIIS 177

Query: 680 VTLPALYNRYEEKVDHCAGTIHRSFSRHYKIVDENVMSRLPRNLPKDK 823
           +T+PALY++YEE VD   G IHR FS+HYK+VDENV+ R+P  L KDK
Sbjct: 178 ITVPALYSKYEEHVDKYFGIIHRKFSKHYKLVDENVIRRIPPGLSKDK 225


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  311 bits (797), Expect = 2e-82
 Identities = 161/242 (66%), Positives = 191/242 (78%), Gaps = 15/242 (6%)
 Frame = +2

Query: 143 MEDSQDVCDPVE-------RDNNTCSTSTS--------SGYRLFDRQTTIHQLMGGGKAA 277
           M++S DV D V        R++   STS++        SGYRLFDRQ ++HQLMG GKAA
Sbjct: 1   MDNSSDVIDTVSGNGGGDSRNDAAASTSSAPSSPRAITSGYRLFDRQDSLHQLMGAGKAA 60

Query: 278 DVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQ 457
           DVLLWK   +S G+I+VATV+W IFERSGL FLTICS+VLL LIVL F+ AN A + +KQ
Sbjct: 61  DVLLWKWWHVSFGVIMVATVSWFIFERSGLPFLTICSDVLLILIVLLFVRANIADMINKQ 120

Query: 458 IQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDITLGKDFRLFFMVVGFLWLLSVLGSL 637
           +Q+LPELVLSEEMVN AAASFR K+N +LLMAHDITLGKDFRLFF VV FLWLLS +GS 
Sbjct: 121 LQSLPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVFLWLLSTVGSY 180

Query: 638 ISFFTLAYIGTILSVTLPALYNRYEEKVDHCAGTIHRSFSRHYKIVDENVMSRLPRNLPK 817
            SFFTLAYIGTILS+T+PALY+RYEE+VD C G IHR  S HYKIVDE+V+SR+P++L K
Sbjct: 181 FSFFTLAYIGTILSITIPALYSRYEERVDRCCGIIHRKLSHHYKIVDESVISRIPQSLSK 240

Query: 818 DK 823
           DK
Sbjct: 241 DK 242


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score =  283 bits (724), Expect = 5e-74
 Identities = 138/206 (66%), Positives = 171/206 (83%)
 Frame = +2

Query: 206 TSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTIC 385
           +SS YRL  RQ T+HQ MGGGKAAD+LLW+RR +SLG+II++TVAWLIFE SGL FL++ 
Sbjct: 19  SSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVS 78

Query: 386 SNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDIT 565
           S+VLL +I++ F+HA  ++ R++Q+ +LPELVLSEEMVN AAASFR K+N+LL+MAHD+T
Sbjct: 79  SDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVT 138

Query: 566 LGKDFRLFFMVVGFLWLLSVLGSLISFFTLAYIGTILSVTLPALYNRYEEKVDHCAGTIH 745
           +G DFRLFF VV  LWLLS +GS IS  TL YIGTILSVT+PALY++Y+ KVD C GTIH
Sbjct: 139 VGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIH 198

Query: 746 RSFSRHYKIVDENVMSRLPRNLPKDK 823
           R  S HYKIVDENV+SRL  +L KDK
Sbjct: 199 RRLSHHYKIVDENVISRLSWSLSKDK 224


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score =  279 bits (713), Expect = 1e-72
 Identities = 138/207 (66%), Positives = 171/207 (82%), Gaps = 1/207 (0%)
 Frame = +2

Query: 206 TSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTIC 385
           +SS YRL  RQ T+HQ MGGGKAAD+LLW+RR +SLG+II++TVAWLIFE SGL FL++ 
Sbjct: 19  SSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVS 78

Query: 386 SNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDIT 565
           S+VLL +I++ F+HA  ++ R++Q+ +LPELVLSEEMVN AAASFR K+N+LL+MAHD+T
Sbjct: 79  SDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVT 138

Query: 566 LGKDFRLFF-MVVGFLWLLSVLGSLISFFTLAYIGTILSVTLPALYNRYEEKVDHCAGTI 742
           +G DFRLFF  VV  LWLLS +GS IS  TL YIGTILSVT+PALY++Y+ KVD C GTI
Sbjct: 139 VGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTI 198

Query: 743 HRSFSRHYKIVDENVMSRLPRNLPKDK 823
           HR  S HYKIVDENV+SRL  +L KDK
Sbjct: 199 HRRLSHHYKIVDENVISRLSWSLSKDK 225


>ref|NP_001154603.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641454|gb|AEE74975.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 249

 Score =  266 bits (680), Expect = 7e-69
 Identities = 138/229 (60%), Positives = 171/229 (74%), Gaps = 23/229 (10%)
 Frame = +2

Query: 206 TSSGYRLFDRQTTIHQLMGGGK----------------------AADVLLWKRRRISLGI 319
           +SS YRL  RQ T+HQ MGGGK                      AAD+LLW+RR +SLG+
Sbjct: 19  SSSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGV 78

Query: 320 IIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMV 499
           II++TVAWLIFE SGL FL++ S+VLL +I++ F+HA  ++ R++Q+ +LPELVLSEEMV
Sbjct: 79  IIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMV 138

Query: 500 NYAAASFRTKVNYLLLMAHDITLGKDFRLFF-MVVGFLWLLSVLGSLISFFTLAYIGTIL 676
           N AAASFR K+N+LL+MAHD+T+G DFRLFF  VV  LWLLS +GS IS  TL YIGTIL
Sbjct: 139 NSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTIL 198

Query: 677 SVTLPALYNRYEEKVDHCAGTIHRSFSRHYKIVDENVMSRLPRNLPKDK 823
           SVT+PALY++Y+ KVD C GTIHR  S HYKIVDENV+SRL  +L KDK
Sbjct: 199 SVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDK 247


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