BLASTX nr result

ID: Atractylodes21_contig00018283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018283
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   103   2e-20
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    92   6e-17
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    77   1e-12
ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211...    64   1e-08
ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225...    62   6e-08

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 15/139 (10%)
 Frame = +1

Query: 4   PMNLDHAMTLALMVEDKLKAHPSKKGDQRGTTTSYGNRSTPLTPFPITSV---------- 153
           P +LDHAM LA+ VE+KL   P KK + + ++ S  N ++ + P P  S           
Sbjct: 236 PSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAHNPNSYI-PKPTLSAKPTYSFNYPT 294

Query: 154 QSSNTQLG-----GRNNFTFTGGQSRAFGTTPDLNSKGEIRRLTDKELQFKRERGLCFRC 318
           Q+ NT          ++ T     ++   T P     GEIRRL++KELQ+KRE GLCFRC
Sbjct: 295 QTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPFGEIRRLSEKELQYKREHGLCFRC 354

Query: 319 DDKWSAGHRCKRRELSVLL 375
           D+KW+ GHRCK++ELS+LL
Sbjct: 355 DEKWAIGHRCKKKELSILL 373


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
 Frame = +1

Query: 4   PMNLDHAMTLALMVEDKLKAHPSKKGDQRGTTTSYGNRSTPLTPFPITSVQSSNTQLGGR 183
           P NLD AM LAL +E++ + + +++   R  + S  NR     P    S+ S     GG 
Sbjct: 311 PYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNP----SLPSVYGSQGGS 366

Query: 184 NNFTFTGG-QSRAFGTT------PDLNSKG--EIRRLTDKELQFKRERGLCFRCDDKWSA 336
           N  T +    S A  T+      P L+S+G  E+RRLT+KELQ KR +GLCF+CD+KW  
Sbjct: 367 NASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGV 426

Query: 337 GHRCKRRELSVLLVQ 381
           GH+C+R+ELSVL ++
Sbjct: 427 GHQCRRKELSVLFME 441


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 250 GEIRRLTDKELQFKRERGLCFRCDDKWSAGHRCKRRELSVLL 375
           GEIRRL++KELQ KRERGLCFRCDDKWS GHRCK +ELSVLL
Sbjct: 289 GEIRRLSEKELQHKRERGLCFRCDDKWSVGHRCK-KELSVLL 329


>ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
           sativus]
          Length = 674

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = +1

Query: 106 YGNRSTPLTPFPITSVQSSNTQLGGRNNFTFTGGQSRAFGTTPDLNSKGE-IRRLTDKEL 282
           Y     P  P+  T   ++N     R N  F+       G+T + N K    +RL+D E 
Sbjct: 17  YNRGKFPYYPYVHTKSNATNNYQKNRGNVVFSIRTITLRGSTTNENKKERPSKRLSDVEF 76

Query: 283 QFKRERGLCFRCDDKWSAGHRCKRRELSVL 372
           Q KRE+GLCF+CD+K+ +GH+CK +E+  L
Sbjct: 77  QAKREKGLCFKCDEKYYSGHKCKAKEIREL 106


>ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225033 [Cucumis sativus]
          Length = 307

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
 Frame = +1

Query: 1   EPMNLDHAMTLALMVEDKLKAHPSKK--GDQRG-TTTSYGNRSTPLTPFPITSVQSSNTQ 171
           EP  L   M +A  VE +   H      G   G  T SYG   + ++           T+
Sbjct: 5   EPKGLAQMMRIAQKVESREDIHREANLPGYSEGRVTNSYGGTKSNMSANASYGEGKGGTR 64

Query: 172 LGGRNNFTFTGGQSRAFGTTPDLNSKGEIRRLTDKELQFKRERGLCFRCDDKWSAGHRCK 351
              R   T T  +S    TT  +  +G  RRL+D E Q +RE+GLCF C++K+S  H+CK
Sbjct: 65  WPMR---TITLQRS----TTEGVRKEGPTRRLSDAEFQSRREKGLCFLCNEKYSHDHKCK 117

Query: 352 ---RRELSVLLVQXXXXXXXXXXXXXXXQEEVTPVEV 453
              +REL ++LV                Q E+  +EV
Sbjct: 118 AKEQRELRMILVTKEGEEFNIEEGGGNEQSELNTIEV 154


Top