BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018250
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]                81   2e-13
ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...    81   3e-13
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s...    78   2e-12
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478...    77   5e-12
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]                 69   1e-09

>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
          Length = 1770

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
 Frame = +3

Query: 3    HFARDCKSKTGNFARMAMFEDLDLDPDWDIVSADL--NDNNSVYSISEGEDAKISNKSSM 176
            HFAR+C +   +  R+A+FE ++L   +DIVS +   +D++++YSISE E     N+  +
Sbjct: 724  HFARECPNNKRDVKRVAIFEGINLPEGFDIVSVEEGEDDSDAIYSISENE-----NEEEL 778

Query: 177  NAVINTETVFMAFEDQEXXXXXXXXPNPICISEEVLYMANDKAPMLPEYVPTYHPGGTSA 356
            +A +  E VFM  E+ +                                  +Y  G T+ 
Sbjct: 779  DAEVVQEKVFMMREEDQ----------------------------------SYWLGKTN- 803

Query: 357  VREATSMIGSWMPNKELPPESRTCTHEWEEN---TATSYLLCYFCGIRTTDISRLHCPKC 527
                      W     +  +   C H+WE N   T  +++ C+FC   T   SR+HCP C
Sbjct: 804  ---------HWTAMVRVSSQQYYCLHQWEHNKEITVVAHINCHFCKQLTQLRSRIHCPTC 854

Query: 528  KLTSCAVCTQNHLKRQVSTRKK 593
            KLTSC +C   +   +V  + K
Sbjct: 855  KLTSCFMCAPIYCNIKVQQQPK 876


>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
            gi|258547408|gb|ACV74337.1| putative polyprotein
            [Pelargonium vein banding virus]
          Length = 1970

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
 Frame = +3

Query: 3    HFARDCKSKTGNFARMAMFEDLDLDPDWDIVSADLN--DNNSVYSISEGEDAKISNKSSM 176
            HFAR+C+SK GN AR A+ ++LDL PD+D++S DLN  D++++ S SEGE   I+N +  
Sbjct: 939  HFARECRSKKGNIARAAVVDNLDLPPDFDVLSLDLNESDSDAICSFSEGE---IANGARY 995

Query: 177  NAVINTETVFMAFEDQEXXXXXXXXPNPICISEEVLYMANDKAPMLPEYVPTYHPGGTSA 356
                                          + EE+  +  + A ML              
Sbjct: 996  ------------------------------VQEELHKLPYETALMLQSQ----------- 1014

Query: 357  VREATSMIGSWMPNKELPPESRTCTHE--WEENTATSYLLCYFCGIRTTDISRLHCPKCK 530
                     SW    +LP     C H+     N       C FCG++T    R++C  C+
Sbjct: 1015 --------NSWRRTVKLPAYQDCCGHQPTLGPNLTFEQAKCAFCGVQTNPEMRMYCDICR 1066

Query: 531  LTSCAVCTQNHLKRQVSTRK--KEDKVKKEGQDHDPGGLSKHVFDLIREKNEEIKQ 692
            LT+C +C++ +L   V   K        K+   H+    ++ +   ++E  E++K+
Sbjct: 1067 LTACPMCSKYYLDIPVRMNKPPPPPPENKDELIHELVVYTETLLKRVKELEEQLKE 1122


>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
          Length = 1868

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
 Frame = +3

Query: 3    HFARDCKSKTGNFARMAMFEDLDLDPDWDIVSADLNDNNS--VYSISEGEDAKISNKSSM 176
            HFAR+C +   +  R+A+FE ++L  D+DIVS +  +  S  +YSISE E+         
Sbjct: 827  HFARECPNTKRDVKRVAIFEGINLPEDYDIVSVEEGEEESDAIYSISENEE------ELK 880

Query: 177  NAVINTETVFMAFEDQEXXXXXXXXPNPICISEEVLYMANDKAPMLPEYVPTYHPGGTSA 356
              V++ E +FM  E+ +                  L   N    M+      YH      
Sbjct: 881  EEVVHQEKIFMMKEEDQSYW---------------LGKPNHWTAMVRVNHQQYH------ 919

Query: 357  VREATSMIGSWMPNKELPPESRTCTHEWEEN---TATSYLLCYFCGIRTTDISRLHCPKC 527
                                   C H+WE N   T  +++ C+FC   T   SR+HCP C
Sbjct: 920  -----------------------CEHQWEHNKEITVLAHISCHFCKQPTNFKSRVHCPIC 956

Query: 528  KLTSCAVCTQNHLKRQVSTRKK 593
            KLTSC +C+  +   QV  + K
Sbjct: 957  KLTSCFMCSPIYCNIQVQQQPK 978


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
            polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 5/202 (2%)
 Frame = +3

Query: 3    HFARDCKSKTGNFARMAMFEDLDLDPDWDIVSADLNDNNS--VYSISEGEDAKISNKSSM 176
            HFAR+C ++  +  R+A+FE +DL   +DIVS +  +  S  +YSISE ED ++  +   
Sbjct: 796  HFARECPNQRRDVKRVAIFEGIDLPEGFDIVSVEEGEEESDAIYSISENEDGELDTE--- 852

Query: 177  NAVINTETVFMAFEDQEXXXXXXXXPNPICISEEVLYMANDKAPMLPEYVPTYHPGGTSA 356
              V++ +   M  EDQ                                   +Y  G T+ 
Sbjct: 853  --VVHEKVFMMREEDQ-----------------------------------SYWLGKTN- 874

Query: 357  VREATSMIGSWMPNKELPPESRTCTHEWEENT---ATSYLLCYFCGIRTTDISRLHCPKC 527
                      W     +  +   C H+WE N      +++ C+FC   T   SR+HCP C
Sbjct: 875  ---------HWTAMVRVSSQQYHCMHQWEHNKEILVVAHINCHFCKQPTQLRSRIHCPTC 925

Query: 528  KLTSCAVCTQNHLKRQVSTRKK 593
            +LTSC +C   +    V  + K
Sbjct: 926  QLTSCFMCAPIYCNMIVQQQPK 947


>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
          Length = 1872

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
 Frame = +3

Query: 3    HFARDCKSKTGNFARMAMFEDLDLDPDWDIVSADLN--DNNSVYSISEGEDAKISNKSSM 176
            HFAR+C +   +  R+A+FE ++L  D++IVS +    D++++YS+SE E+         
Sbjct: 829  HFARECPNNKRDVKRVAIFEGINLPDDYEIVSVEEGEEDSDAIYSLSENEEE-------- 880

Query: 177  NAVINTETVFMAFEDQEXXXXXXXXPNPICISEEVLYMANDKAPMLPEYVPTYHPGGTSA 356
                                          + +EVL+   +K  M+ E   +Y  G  + 
Sbjct: 881  ------------------------------LQDEVLH---EKVFMIREGDQSYWMGKAN- 906

Query: 357  VREATSMIGSWMPNKELPPESRTCTHEWEENTATSYLL---CYFCGIRTTDISRLHCPKC 527
                      W     +  +   C H+WE N     +    C+FC   T    R+HCP C
Sbjct: 907  ---------HWTAMVRVSYQQYHCPHQWEHNKEIPIMALINCHFCKQPTNLRGRVHCPTC 957

Query: 528  KLTSCAVCTQNHLKRQVSTRKK 593
            +LTSC +C   +   QV  + K
Sbjct: 958  QLTSCYMCAPIYCDVQVQQQPK 979