BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018241
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   130   2e-28
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              130   2e-28
gb|AFK38759.1| unknown [Lotus japonicus]                              129   3e-28
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   129   3e-28
ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thal...   129   6e-28

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  130 bits (328), Expect = 2e-28
 Identities = 61/105 (58%), Positives = 81/105 (77%)
 Frame = +1

Query: 1   VWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHRYGIGGEVR 180
           VW D  TT++E+TADT I+ PD S +KQLMR H+ NLL VL PKER++IR R+GIG  + 
Sbjct: 468 VWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIP 527

Query: 181 KSLADIGIIMGVSKERIRQLESRSLFKLKQYSESQGLDAYKDLLV 315
           ++L++IG++ G SKER+RQLE R+L KLKQ   S GL++Y DLLV
Sbjct: 528 RTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 572


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  130 bits (328), Expect = 2e-28
 Identities = 61/105 (58%), Positives = 81/105 (77%)
 Frame = +1

Query: 1   VWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHRYGIGGEVR 180
           VW D  TT++E+TADT I+ PD S +KQLMR H+ NLL VL PKER++IR R+GIG  + 
Sbjct: 457 VWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIP 516

Query: 181 KSLADIGIIMGVSKERIRQLESRSLFKLKQYSESQGLDAYKDLLV 315
           ++L++IG++ G SKER+RQLE R+L KLKQ   S GL++Y DLLV
Sbjct: 517 RTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561


>gb|AFK38759.1| unknown [Lotus japonicus]
          Length = 311

 Score =  129 bits (325), Expect = 3e-28
 Identities = 64/105 (60%), Positives = 79/105 (75%)
 Frame = +1

Query: 1   VWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHRYGIGGEVR 180
           VW D  TTY+EITADT I++PD   +KQLMR H  NLL  LNP+ER++IR R+GI     
Sbjct: 207 VWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYE 266

Query: 181 KSLADIGIIMGVSKERIRQLESRSLFKLKQYSESQGLDAYKDLLV 315
           KSL++IG + G+SKER+RQLESR+L KLKQ   S GLDAY +LLV
Sbjct: 267 KSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAYANLLV 311


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/105 (57%), Positives = 83/105 (79%)
 Frame = +1

Query: 1   VWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHRYGIGGEVR 180
           +W D  TT++EIT D+ I++P  S  KQ+MRNH+ NLL VL+PKER++I+ R+GI G  +
Sbjct: 442 IWSDQDTTFQEITPDSGIETPTMSVGKQMMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQ 501

Query: 181 KSLADIGIIMGVSKERIRQLESRSLFKLKQYSESQGLDAYKDLLV 315
           +SL++IG I G+SKER+RQLESR+L++LKQ+  S GL AY DLLV
Sbjct: 502 RSLSEIGEIYGLSKERVRQLESRALYRLKQHMNSHGLHAYADLLV 546


>ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thaliana]
           gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
           polymerase sigma factor sigF, chloroplastic; Short=Sigma
           factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
           OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
           polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
           factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
           SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
           sigma factor-like protein [Arabidopsis thaliana]
           gi|16604647|gb|AAL24116.1| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20197948|gb|AAD31584.2| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20259557|gb|AAM14121.1| putative RNA polymerase
           sigma-70 factor protein [Arabidopsis thaliana]
           gi|330254238|gb|AEC09332.1| RNApolymerase sigma-subunit
           F [Arabidopsis thaliana]
          Length = 547

 Score =  129 bits (323), Expect = 6e-28
 Identities = 61/105 (58%), Positives = 82/105 (78%)
 Frame = +1

Query: 1   VWPDDSTTYEEITADTTIDSPDTSASKQLMRNHISNLLGVLNPKERKVIRHRYGIGGEVR 180
           +W D  TT++EIT D+ I++P  S  KQLMRNH+ NLL VL+PKER++I+ R+GI G  +
Sbjct: 443 IWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQ 502

Query: 181 KSLADIGIIMGVSKERIRQLESRSLFKLKQYSESQGLDAYKDLLV 315
           +SL++IG I G+SKER+RQLESR+L++LKQ   S GL AY DLLV
Sbjct: 503 RSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYADLLV 547