BLASTX nr result

ID: Atractylodes21_contig00018223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018223
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinife...   120   4e-25
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...   104   2e-20
gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]       102   8e-20
ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isofor...   100   2e-19
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...   100   4e-19

>emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinifera]
           gi|297740676|emb|CBI30858.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  120 bits (300), Expect = 4e-25
 Identities = 69/164 (42%), Positives = 86/164 (52%)
 Frame = +3

Query: 72  MTEEGKSRGVAFPGDXXXXXXXXXXXXHYYGTFQGVANHXXXXXXXXXXXXXSLGYXXXX 251
           M+EEGKSRG++                  YGTFQGVAN+              +      
Sbjct: 1   MSEEGKSRGLSGQQSNQIP----------YGTFQGVANYPPLPPAHHPQPVIGI------ 44

Query: 252 XXXXXXXXXXYYAHGYQTVPGFVVAQGTHVVIERTLPXXXXXXXXXXXXXXXXXXAVPWY 431
                     YY+HGYQTVPG+ V +G   V ER LP                  A+PWY
Sbjct: 45  --PQPVPPPGYYSHGYQTVPGYAVVEG-RPVRERRLPCCGIGIGWLLFIIGFFCAAIPWY 101

Query: 432 VGAFILLCVRVDYREKPGLVACTLAAILAMIAVCLGVRRVTYNW 563
           +GAFILLCVRVDYREKPGL+ACT+A +LA+IA+ LGV + T+ W
Sbjct: 102 IGAFILLCVRVDYREKPGLIACTIATVLAVIAITLGVTKGTHAW 145


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  104 bits (259), Expect = 2e-20
 Identities = 60/133 (45%), Positives = 69/133 (51%)
 Frame = +3

Query: 156 YYGTFQGVANHXXXXXXXXXXXXXSLGYXXXXXXXXXXXXXXYYAHGYQTVPGFVVAQGT 335
           +YGTFQGV  +               G               YYAHGYQ VPG+ VA+GT
Sbjct: 12  HYGTFQGVPTYSQPPAVGFPQPVPPPG--AAEPSAPPPPPPQYYAHGYQAVPGYAVAEGT 69

Query: 336 HVVIERTLPXXXXXXXXXXXXXXXXXXAVPWYVGAFILLCVRVDYREKPGLVACTLAAIL 515
            V  ER LP                  AVPWYVG F+LLC RVDYREKPG +ACT+AAIL
Sbjct: 70  PVR-ERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGYIACTIAAIL 128

Query: 516 AMIAVCLGVRRVT 554
           A IA+  GV + T
Sbjct: 129 ATIAIIFGVTKGT 141


>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score =  102 bits (254), Expect = 8e-20
 Identities = 62/159 (38%), Positives = 78/159 (49%)
 Frame = +3

Query: 72  MTEEGKSRGVAFPGDXXXXXXXXXXXXHYYGTFQGVANHXXXXXXXXXXXXXSLGYXXXX 251
           M+EE K+   AF  D            H YGTFQGVAN+              +      
Sbjct: 1   MSEEDKADNRAFVVDHQH---------HQYGTFQGVANYPPPHHQPVIGFPQPV--PPPG 49

Query: 252 XXXXXXXXXXYYAHGYQTVPGFVVAQGTHVVIERTLPXXXXXXXXXXXXXXXXXXAVPWY 431
                     YYA+ YQTVPG+ VA+G   V ER LP                  A+PWY
Sbjct: 50  ATEPSSPLPPYYAYAYQTVPGYAVAEG-RPVRERRLPCCGIGVGWFLFIIGFFLGAIPWY 108

Query: 432 VGAFILLCVRVDYREKPGLVACTLAAILAMIAVCLGVRR 548
           VG F+LLC R+D REKPG +ACT+AA+LA +A+ LGV +
Sbjct: 109 VGLFVLLCARIDPREKPGYIACTIAAVLATVAIILGVTK 147


>ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isoform 2 [Vitis vinifera]
          Length = 299

 Score =  100 bits (250), Expect = 2e-19
 Identities = 60/145 (41%), Positives = 72/145 (49%)
 Frame = +3

Query: 72  MTEEGKSRGVAFPGDXXXXXXXXXXXXHYYGTFQGVANHXXXXXXXXXXXXXSLGYXXXX 251
           M+EEGKSRG++                  YGTFQGVAN+              +      
Sbjct: 1   MSEEGKSRGLSGQQSNQIP----------YGTFQGVANYPPLPPAHHPQPVIGI------ 44

Query: 252 XXXXXXXXXXYYAHGYQTVPGFVVAQGTHVVIERTLPXXXXXXXXXXXXXXXXXXAVPWY 431
                     YY+HGYQTVPG+ V +G   V ER LP                  A+PWY
Sbjct: 45  --PQPVPPPGYYSHGYQTVPGYAVVEG-RPVRERRLPCCGIGIGWLLFIIGFFCAAIPWY 101

Query: 432 VGAFILLCVRVDYREKPGLVACTLA 506
           +GAFILLCVRVDYREKPGL+ACT+A
Sbjct: 102 IGAFILLCVRVDYREKPGLIACTIA 126


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score =  100 bits (248), Expect = 4e-19
 Identities = 58/135 (42%), Positives = 70/135 (51%)
 Frame = +3

Query: 159 YGTFQGVANHXXXXXXXXXXXXXSLGYXXXXXXXXXXXXXXYYAHGYQTVPGFVVAQGTH 338
           YGTFQGVAN+              +G+               Y HGYQTVPG+ VA+G  
Sbjct: 38  YGTFQGVANYPPPHPPQHPV----IGFPQPVPPPGASEPPA-YPHGYQTVPGYAVAEG-R 91

Query: 339 VVIERTLPXXXXXXXXXXXXXXXXXXAVPWYVGAFILLCVRVDYREKPGLVACTLAAILA 518
            V ER LP                  A+PWYVG FILLC R+D REKPG VACT+AA+LA
Sbjct: 92  PVRERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFILLCARIDPREKPGYVACTIAAVLA 151

Query: 519 MIAVCLGVRRVTYNW 563
            IA+ LG  +   +W
Sbjct: 152 TIAIVLGATKGADDW 166


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