BLASTX nr result

ID: Atractylodes21_contig00018176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018176
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   128   8e-28
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   127   1e-27
ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|2...   118   8e-25
ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...   115   5e-24
ref|XP_002298761.1| predicted protein [Populus trichocarpa] gi|1...   115   7e-24

>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  128 bits (321), Expect = 8e-28
 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
 Frame = +3

Query: 93  MAMPLGAFPTFLTGETASPAKYSTSSLKLVTSAAFQPFQ--ANLRTARSFVTYATAAEPK 266
           MAM LG   TF +GETAS   +S S+L L +     P     NLR  R+ VT A A++P 
Sbjct: 1   MAMSLGVISTFFSGETAS---FSKSALSLTSLRHLPPPSPHTNLRLVRT-VTSAAASKPP 56

Query: 267 KLLTG------INKSKPVSPELKDFLGGKTEVSRPTALKEVWAYIKEKKLQDPTNGRIIV 428
              TG      I K + +SPE++DFLG   E+ R  ALK++WAYIK+  LQDP N +IIV
Sbjct: 57  AAATGKREPRGIMKPRRISPEMQDFLG-VPEIPRTQALKQIWAYIKQHNLQDPENKKIIV 115

Query: 429 CDEKLKIIFGGKERVGFAEVTGLLSPHF 512
           CDEKLK IF GK+RVGF E+ GL++PHF
Sbjct: 116 CDEKLKSIFAGKDRVGFLEIAGLINPHF 143


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  127 bits (320), Expect = 1e-27
 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
 Frame = +3

Query: 93  MAMPLGAFPTFLTGETASPAKYSTSSLKLVTSAAFQPFQ--ANLRTARSFVTYATAAEPK 266
           MAM LG   TF +GETAS   +S S+L L +     P     NLR  R+ VT A A++P 
Sbjct: 1   MAMSLGVXSTFFSGETAS---FSKSALSLTSLRHLPPPSPHTNLRLVRT-VTSAAASKPP 56

Query: 267 KLLTG------INKSKPVSPELKDFLGGKTEVSRPTALKEVWAYIKEKKLQDPTNGRIIV 428
              TG      I K + +SPE++DFLG   E+ R  ALK++WAYIK+  LQDP N +IIV
Sbjct: 57  AAATGKREPRGIMKPRRISPEMQDFLG-VPEIPRTQALKQIWAYIKQHNLQDPENKKIIV 115

Query: 429 CDEKLKIIFGGKERVGFAEVTGLLSPHF 512
           CDEKLK IF GK+RVGF E+ GL++PHF
Sbjct: 116 CDEKLKSIFAGKDRVGFLEIAGLINPHF 143


>ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|222849570|gb|EEE87117.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  118 bits (295), Expect = 8e-25
 Identities = 69/141 (48%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
 Frame = +3

Query: 93  MAMPLGAFPTFLTGETASPAKYSTSSLKLVTSAAFQPFQANLRTARS-FVTYATAAEPKK 269
           MA+  G F TFL+ ET    K+ + +  L       P  AN R  RS  VT ATA+   +
Sbjct: 1   MAISSGIFSTFLSTETVPLLKFPSPTSTLPLRFLAAP-PANPRMVRSTVVTCATASTGNR 59

Query: 270 LLTGINKSKPVSPELKDFLGGKTEVSRPTALKEVWAYIKEKKLQDPTNGRIIVCDEKLKI 449
              GI K + VSPE+ DF+G   EVSR  ALK +WA+IKE  LQDP+N + I+CDEKLK 
Sbjct: 60  APRGIMKPRRVSPEMADFIGAP-EVSRTQALKLIWAHIKEHNLQDPSNKKNIICDEKLKK 118

Query: 450 IFGGKERVGFAEVTGLLSPHF 512
           IF G+++VGF E+ GL+SPHF
Sbjct: 119 IFAGRDQVGFLEIAGLISPHF 139


>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score =  115 bits (288), Expect = 5e-24
 Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 4/144 (2%)
 Frame = +3

Query: 93  MAMPLGAFPTFLTGETASPAK-YSTSSLKLVTSAAFQPFQANLRTARSFVTYATAA---E 260
           MA+  G   + L+ +T S  K Y +SS+ LV      P  ANLR  R+    AT +   +
Sbjct: 1   MAITSGILSSVLSPQTVSFLKPYPSSSMLLVAP----PSSANLRMVRTVTCCATVSSQQQ 56

Query: 261 PKKLLTGINKSKPVSPELKDFLGGKTEVSRPTALKEVWAYIKEKKLQDPTNGRIIVCDEK 440
            ++   GI K + VSPE+ + +G  +E+ R  ALK +WA+IKE  LQDP N +II+CDEK
Sbjct: 57  EQRRPRGIMKPRRVSPEMAELVGA-SEIPRTQALKRIWAHIKENNLQDPENKKIIICDEK 115

Query: 441 LKIIFGGKERVGFAEVTGLLSPHF 512
           LK IFGG++RVGF EV GL+SPHF
Sbjct: 116 LKKIFGGRDRVGFLEVAGLISPHF 139


>ref|XP_002298761.1| predicted protein [Populus trichocarpa] gi|118485810|gb|ABK94753.1|
           unknown [Populus trichocarpa]
           gi|222846019|gb|EEE83566.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score =  115 bits (287), Expect = 7e-24
 Identities = 70/135 (51%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
 Frame = +3

Query: 114 FPTFLTGETASPAK--YSTSSLKLVTSAAFQPFQANLRTARSFVTYATAAEPKKLLTGIN 287
           FP FL+ ET    K  + TSS  L   AA +P   NLR  R+ VT ATA+   +  +GI 
Sbjct: 9   FP-FLSTETVPLLKPPFHTSSPSLRILAA-RP--VNLRMGRTVVTCATASTGNRAPSGIM 64

Query: 288 KSKPVSPELKDFLGGKTEVSRPTALKEVWAYIKEKKLQDPTNGRIIVCDEKLKIIFGGKE 467
           K K VSPE+ DF+G   EVSR   LK +WA+IKE+ LQDP+N + I+CDEKLK IF G++
Sbjct: 65  KPKRVSPEMADFVGAP-EVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEKLKKIFPGRD 123

Query: 468 RVGFAEVTGLLSPHF 512
           +VGF E+ GL+SPHF
Sbjct: 124 QVGFLEIAGLISPHF 138


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