BLASTX nr result

ID: Atractylodes21_contig00018146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018146
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   236   1e-60
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   236   1e-60
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   232   2e-59
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
gb|AAF36454.1|AF127564_1 ubiquitin-protein ligase 1 [Arabidopsis...   231   6e-59

>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  236 bits (602), Expect = 1e-60
 Identities = 115/124 (92%), Positives = 118/124 (95%)
 Frame = +3

Query: 3    SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNAI 182
            SDI DLTFSMDADEEKHILYEK EVTDYELKPGGRNIRVTEETKHEYVDLVAEH+LTNAI
Sbjct: 3499 SDIPDLTFSMDADEEKHILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVAEHLLTNAI 3558

Query: 183  RPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEIDLDDLKANAEYTGYTVGSNVVL 362
            RPQINSFLEGFNEL+P +LISIFNDKELELLISGLPEIDLDDLKAN EYTGYTV SNVV 
Sbjct: 3559 RPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTVASNVVQ 3618

Query: 363  WFWE 374
            WFWE
Sbjct: 3619 WFWE 3622


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  236 bits (602), Expect = 1e-60
 Identities = 115/124 (92%), Positives = 118/124 (95%)
 Frame = +3

Query: 3    SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNAI 182
            SDI DLTFSMDADEEKHILYEK EVTDYELKPGGRNIRVTEETKHEYVDLVAEH+LTNAI
Sbjct: 3525 SDIPDLTFSMDADEEKHILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVAEHLLTNAI 3584

Query: 183  RPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEIDLDDLKANAEYTGYTVGSNVVL 362
            RPQINSFLEGFNEL+P +LISIFNDKELELLISGLPEIDLDDLKAN EYTGYTV SNVV 
Sbjct: 3585 RPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTVASNVVQ 3644

Query: 363  WFWE 374
            WFWE
Sbjct: 3645 WFWE 3648


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/124 (91%), Positives = 117/124 (94%)
 Frame = +3

Query: 3    SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNAI 182
            SDI DLTFSMDADEEKHILYEKTEVTD+ELKPGGRNIRVTEETKHEYVDLVA+HILTNAI
Sbjct: 3477 SDIPDLTFSMDADEEKHILYEKTEVTDFELKPGGRNIRVTEETKHEYVDLVADHILTNAI 3536

Query: 183  RPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEIDLDDLKANAEYTGYTVGSNVVL 362
            RPQINSFLEGFNEL+P +LISIFNDKELELLISGLPEIDLDDLKAN EYTGYT  S VV 
Sbjct: 3537 RPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTAASTVVQ 3596

Query: 363  WFWE 374
            WFWE
Sbjct: 3597 WFWE 3600


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  232 bits (591), Expect = 3e-59
 Identities = 113/124 (91%), Positives = 117/124 (94%)
 Frame = +3

Query: 3    SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNAI 182
            SDI DLTFSMDADEEKHILYEKT+VTDYELKPGGRNIRVTEETKHEYVDLVA+HILTNAI
Sbjct: 3449 SDIPDLTFSMDADEEKHILYEKTQVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAI 3508

Query: 183  RPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEIDLDDLKANAEYTGYTVGSNVVL 362
            RPQINSFLEGFNEL+P +LISIFNDKELELLISGLPEIDLDDLKAN EYTGYT  S VV 
Sbjct: 3509 RPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTPASGVVQ 3568

Query: 363  WFWE 374
            WFWE
Sbjct: 3569 WFWE 3572



 Score =  175 bits (444), Expect = 3e-42
 Identities = 96/153 (62%), Positives = 106/153 (69%), Gaps = 33/153 (21%)
 Frame = +3

Query: 15   DLTFSMDAD---EEKHILYEKT--EVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNA 179
            D+TF  + +   + +H+ Y K    VTDYELKPGGRNIRVTEETKHEYVDLVA+HILTNA
Sbjct: 1657 DVTFQPNPNSVYQTEHLSYFKFVGRVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNA 1716

Query: 180  IRPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEID-------------------- 299
            IRPQINSFLEGFNEL+P +LISIFNDKELELLISGLPEID                    
Sbjct: 1717 IRPQINSFLEGFNELVPRELISIFNDKELELLISGLPEIDCELAFLLSRSIYVVLFSLKY 1776

Query: 300  --------LDDLKANAEYTGYTVGSNVVLWFWE 374
                    +DDLKAN EYTGYT  S VV WFWE
Sbjct: 1777 LTSKTAVAVDDLKANTEYTGYTPASGVVQWFWE 1809


>gb|AAF36454.1|AF127564_1 ubiquitin-protein ligase 1 [Arabidopsis thaliana]
          Length = 3681

 Score =  231 bits (588), Expect = 6e-59
 Identities = 112/124 (90%), Positives = 116/124 (93%)
 Frame = +3

Query: 3    SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTNAI 182
            SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVA HILTNAI
Sbjct: 3467 SDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAI 3526

Query: 183  RPQINSFLEGFNELIPSDLISIFNDKELELLISGLPEIDLDDLKANAEYTGYTVGSNVVL 362
            RPQIN+FLEGFNELIP +L+SIFNDKELELLISGLPEID DDLKAN EYT YT GS V+ 
Sbjct: 3527 RPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTAGSPVIH 3586

Query: 363  WFWE 374
            WFWE
Sbjct: 3587 WFWE 3590


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