BLASTX nr result

ID: Atractylodes21_contig00018137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018137
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   286   4e-75
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              285   1e-74
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   279   7e-73
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   278   1e-72
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69

>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  286 bits (733), Expect = 4e-75
 Identities = 172/300 (57%), Positives = 206/300 (68%), Gaps = 15/300 (5%)
 Frame = -1

Query: 893  SRKSNFEHGEMIGTQRGFSKNGGNSSSIHMKMKEGKYRQEIEEIWLEVLENIPINSIKEF 714
            S +++F H   +  Q   S    ++  I+ K   GK R+  EEIWLEV+  I  NSIKEF
Sbjct: 814  STETSFNHKTGVAPQWA-SALSSDTVRINGKQVSGKTRKGYEEIWLEVIGKIQFNSIKEF 872

Query: 713  LYHEGKLASLSFGEAPTVQLIFTSHLTKSKAEKFKTHILKAFEHVLGSHVTIEIRGESRK 534
            LY EGKL S+SFG APTVQL+F+SHLTK KAEKF+ HIL+AFE V GS +T+EIR ES +
Sbjct: 873  LYQEGKLISVSFGAAPTVQLMFSSHLTKLKAEKFRAHILQAFESVFGSQITLEIRCESNR 932

Query: 533  EVGKGREMQLTLPASEEDLYAKRRSEIVEVEEASPRELKAKLQVDNN----------DKV 384
            ++  G      LPA E       RSEIVE+  ASPRE+K     DN+           + 
Sbjct: 933  DMTGG----FHLPAGES--LDVGRSEIVEI-PASPREIKGSGHADNDAESSKRALQRARA 985

Query: 383  EATSSHKNSSSGF---QRRLGEQSQSMSLVRGKVSLANVIQQAE--SQRNGWSTRKAVSI 219
              + SHKNSS G    +R+LGE SQS SLVR KVSLA+VIQQAE  +Q+ GWS RKAVSI
Sbjct: 986  GESVSHKNSSIGSMSERRKLGEPSQSKSLVRSKVSLAHVIQQAEGCTQQTGWSKRKAVSI 1045

Query: 218  AEKLEQENLRLEPRSRSLLCMKASRVAGRKISRLKFRPRKPRALLRFVSCGRCLSSRSPR 39
            AEKLEQENLRLEPRSRSLLC KASRV  RK+SRLK R RKP ALL+ VSCG+C+SS+SPR
Sbjct: 1046 AEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRTRKPHALLKLVSCGKCISSKSPR 1105


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  285 bits (729), Expect = 1e-74
 Identities = 163/281 (58%), Positives = 203/281 (72%), Gaps = 14/281 (4%)
 Frame = -1

Query: 839  SKNGGNSSSIHMKMKEGKYRQEIEEIWLEVLENIPINSIKEFLYHEGKLASLSFGEAPTV 660
            S +  +++ +  K   GK R+EIEEIWLEVLE I ++++KEFLY EGKL S+S G APTV
Sbjct: 647  SAHSADTNRLSGKQIPGKVRKEIEEIWLEVLEKIQVDTLKEFLYKEGKLISVSIGAAPTV 706

Query: 659  QLIFTSHLTKSKAEKFKTHILKAFEHVLGSHVTIEIRGESRKEVGKGREMQLTLPASEE- 483
            QL+F+SHLTKSKAEK++ HIL+AFE +LGS VTIEIR ESRK+   G  + L   A+++ 
Sbjct: 707  QLMFSSHLTKSKAEKYRGHILRAFESILGSPVTIEIRSESRKDAKAGAHVPLIFSAAKDL 766

Query: 482  --------DLYAKRRSEIVEVEEASPRELKAKLQVDNNDKVEATSSHKNSSSGF---QRR 336
                    +     RSEIVE+   SPREL       N+   EA+SSH+ S+      +R+
Sbjct: 767  PSQMLLNANSLEMGRSEIVEI-LPSPREL-------NSWAGEASSSHRKSTMASVPERRK 818

Query: 335  LGEQSQSMSLVRGKVSLANVIQQAE--SQRNGWSTRKAVSIAEKLEQENLRLEPRSRSLL 162
             GEQS S SLVR KVSLA+VIQQAE  SQR+GW+ RKAVSIAEKLEQENLRLEPRSRSLL
Sbjct: 819  FGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEPRSRSLL 878

Query: 161  CMKASRVAGRKISRLKFRPRKPRALLRFVSCGRCLSSRSPR 39
            C KAS+V  RK+SR K R R+P +LL+ VSCG+CLSS+SPR
Sbjct: 879  CWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 919


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  279 bits (713), Expect = 7e-73
 Identities = 168/307 (54%), Positives = 201/307 (65%), Gaps = 38/307 (12%)
 Frame = -1

Query: 845  GFSKNGGNSSSIH-MKMKE----GKYRQEIEEIWLEVLENIPINSIKEFLYHEGKLASLS 681
            GF+    NS +   ++M E    G  R +IEEIWLEVLE I I  +KEFL+ EGKL S+S
Sbjct: 885  GFTPQHANSQATEKIRMSERQILGINRTKIEEIWLEVLERIQITGLKEFLFKEGKLISVS 944

Query: 680  FGEAPTVQLIFTSHLTKSKAEKFKTHILKAFEHVLGSHVTIEIRGESRKEVGKGREMQLT 501
            FG APTVQL+F+S LTKS AEKF+ HIL+AFE VLGS +TIEIR E  K+     +  LT
Sbjct: 945  FGAAPTVQLMFSSQLTKSTAEKFRGHILQAFESVLGSSITIEIRCELNKDTASAVQQPLT 1004

Query: 500  LPASEE--------------------DLYAKRRSEIVEVEEASPRELKAKLQVDNND--- 390
            LP++ +                    D   KRR EIVE   +   +  +K QVD +    
Sbjct: 1005 LPSTNDSSSQIRDFNGVGTLAHPSVTDSVEKRRGEIVEEAASQVEQKNSKQQVDAHGTSY 1064

Query: 389  -KVEATSSHKNSSSGF---------QRRLGEQSQSMSLVRGKVSLANVIQQAESQRNGWS 240
              +E TS  ++S+S           QR+L EQ QS SLVR KVSLA+VIQQAE QR+GWS
Sbjct: 1065 KSLEGTSIGQSSASQKKPIVKSHLDQRKLMEQGQSRSLVRSKVSLAHVIQQAEGQRSGWS 1124

Query: 239  TRKAVSIAEKLEQENLRLEPRSRSLLCMKASRVAGRKISRLKFRPRKPRALLRFVSCGRC 60
             RKAVSIAEKLEQENLRLEPRSRSLLC KASRV  RK+SRLK R RKPRALL  VSCG+C
Sbjct: 1125 KRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRSRKPRALLNLVSCGKC 1184

Query: 59   LSSRSPR 39
            LS++SPR
Sbjct: 1185 LSTKSPR 1191


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  278 bits (711), Expect = 1e-72
 Identities = 164/300 (54%), Positives = 200/300 (66%), Gaps = 15/300 (5%)
 Frame = -1

Query: 893  SRKSNFEHGEMIGTQRGFSKNGGNSSSIHMKMKE--GKYRQEIEEIWLEVLENIPINSIK 720
            S  ++F H      Q   S+    +  I M  ++  GK  +EIEEIWLEVLE I +  +K
Sbjct: 811  SSDNSFNHRSGFTPQHAHSQT---TDKIRMSERQILGKNHKEIEEIWLEVLERIQVTGLK 867

Query: 719  EFLYHEGKLASLSFGEAPTVQLIFTSHLTKSKAEKFKTHILKAFEHVLGSHVTIEIRGES 540
            EFL+ EGKL S+SFG APTVQL+F+S LTKS AEKF+ HIL+AFE VLGS +TIEIR E 
Sbjct: 868  EFLFKEGKLISVSFGAAPTVQLMFSSQLTKSTAEKFRGHILQAFESVLGSSITIEIRCEL 927

Query: 539  RKEVGKGREMQLTLPASEEDLYAKRRSEIVEVEEASPRELKAKLQVDNND----KVEATS 372
             K+     +  LT      D   KRR EIVE   +    + ++ QVD +      +E TS
Sbjct: 928  NKDAASAVQQPLT------DSVEKRRGEIVEEAASQVEHMNSEQQVDAHGTSYKSLEGTS 981

Query: 371  SHKNSSSGF---------QRRLGEQSQSMSLVRGKVSLANVIQQAESQRNGWSTRKAVSI 219
              ++S+S           +R+L EQ QS SLVR KVSLA+VIQQAE QR+GWS RKAVSI
Sbjct: 982  IGQSSASQKMPIVKSHLDERKLMEQGQSRSLVRSKVSLAHVIQQAEGQRSGWSKRKAVSI 1041

Query: 218  AEKLEQENLRLEPRSRSLLCMKASRVAGRKISRLKFRPRKPRALLRFVSCGRCLSSRSPR 39
            AEKLEQENLRLEPRSRSL+C KASRV  RK+SRLK R RKPRALL  VSCG+CLS++SPR
Sbjct: 1042 AEKLEQENLRLEPRSRSLICWKASRVTRRKLSRLKIRSRKPRALLNLVSCGKCLSTKSPR 1101


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  268 bits (685), Expect = 1e-69
 Identities = 160/293 (54%), Positives = 192/293 (65%), Gaps = 35/293 (11%)
 Frame = -1

Query: 812  IHMKMKEGKYRQEIEEIWLEVLENIPINSIKEFLYHEGKLASLSFGEAPTVQLIFTSHLT 633
            ++ +   GK  +  EEIWLEVLE I INS++EFLY EGKL S+SFG APTVQLIF+SH T
Sbjct: 897  VNSRQVSGKSHKGYEEIWLEVLEKIQINSMREFLYQEGKLISVSFGAAPTVQLIFSSHFT 956

Query: 632  KSKAEKFKTHILKAFEHVLGSHVTIEIRGESRKEVGKGREMQLTLPASEEDL-------- 477
            K KAEKF+ HIL+AFE VLGS VTIEIR ES KE   G  + L LPAS+           
Sbjct: 957  KLKAEKFRAHILQAFESVLGSPVTIEIRCESNKETSAGFRVPLILPASKNGSSQMAIDPV 1016

Query: 476  ------------YAKRRSEIVEVEEASPRELKAKLQVDNN----------DKVEATSSHK 363
                        Y + RSEIVEV   SPR+ +     ++N           +   + S+K
Sbjct: 1017 LNAGSRMPRTGDYLEGRSEIVEV-PTSPRKYEGNEPTNHNVESSRRGLQHTRAGESVSNK 1075

Query: 362  NSSSGF---QRRLGEQSQSMSLVRGKVSLANVIQQAE--SQRNGWSTRKAVSIAEKLEQE 198
              + G    +R+LGE SQS S+VR KVSLA VIQQAE  +Q+ GWS  KAVSIAEKLEQE
Sbjct: 1076 KPAVGSLVERRKLGETSQSKSIVRSKVSLARVIQQAEGCTQQAGWSKHKAVSIAEKLEQE 1135

Query: 197  NLRLEPRSRSLLCMKASRVAGRKISRLKFRPRKPRALLRFVSCGRCLSSRSPR 39
            NLRLEPRSR LLC KA+RV  RK+SRL  R RKP +LL+ VSCG+CLSS+SPR
Sbjct: 1136 NLRLEPRSRCLLCWKATRVTRRKLSRLNIRTRKPHSLLKLVSCGKCLSSKSPR 1188


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