BLASTX nr result

ID: Atractylodes21_contig00018102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018102
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   128   3e-27
emb|CBI34365.3| unnamed protein product [Vitis vinifera]              122   2e-25
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   122   2e-25
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   121   3e-25
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...   113   9e-23

>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  128 bits (321), Expect = 3e-27
 Identities = 65/106 (61%), Positives = 72/106 (67%)
 Frame = -3

Query: 794 REGRSASPPNXXXXXXXXXXXXXXXXXXXXXXSTDSADVSNPGNNLYVTGISTRVDTSDL 615
           REGRS SP N                      S DS D SNPGNNLYVTG+STRV +SDL
Sbjct: 5   REGRSVSPRNSGSPGRGRRSRSLSRSRRSRSRSNDSGDASNPGNNLYVTGLSTRVTSSDL 64

Query: 614 ENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMETTADADRCVQYLN 477
           E +F+ EGKV ECHLVTDPRT+ SRGFAFVTMET  DA+RCV+YLN
Sbjct: 65  EKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANRCVKYLN 110


>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  122 bits (305), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = -3

Query: 692 DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 513
           DS D  NPGNNLYVTG+STRV+ SDLE +FN EGKV ECHLVTDPRT+ SRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 512 TADADRCVQYLN 477
             DADRC++YLN
Sbjct: 105 VEDADRCIKYLN 116


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  122 bits (305), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = -3

Query: 692 DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 513
           DS D  NPGNNLYVTG+STRV+ SDLE +FN EGKV ECHLVTDPRT+ SRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 512 TADADRCVQYLN 477
             DADRC++YLN
Sbjct: 105 VEDADRCIKYLN 116


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  121 bits (303), Expect = 3e-25
 Identities = 63/106 (59%), Positives = 70/106 (66%)
 Frame = -3

Query: 794 REGRSASPPNXXXXXXXXXXXXXXXXXXXXXXSTDSADVSNPGNNLYVTGISTRVDTSDL 615
           REGRSASP                         + S D +NPGNNLYVTG+STRV T DL
Sbjct: 5   REGRSASP-RASISPAKARRSRSLSRSRRSRSRSRSVDAANPGNNLYVTGLSTRVTTGDL 63

Query: 614 ENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMETTADADRCVQYLN 477
           E +F KEGKV ECHLVTDPRT+ SRGFAFVTMET  DA+RCV+YLN
Sbjct: 64  EKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAERCVKYLN 109


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Glycine max]
          Length = 191

 Score =  113 bits (282), Expect = 9e-23
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = -3

Query: 692 DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 513
           DSADV NPGNNLYVTG+STR+  SDL  +F+KEGKV +CHLV DP TK SRGF FVTMET
Sbjct: 37  DSADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMET 96

Query: 512 TADADRCVQYLN 477
             DA+ C++YLN
Sbjct: 97  NDDAECCIKYLN 108


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