BLASTX nr result

ID: Atractylodes21_contig00018075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018075
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   414   e-113
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   404   e-110
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   392   e-106
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   334   3e-89
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...   330   7e-88

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  414 bits (1064), Expect = e-113
 Identities = 216/416 (51%), Positives = 281/416 (67%), Gaps = 14/416 (3%)
 Frame = +1

Query: 88   MDSDFENEPRNKKMKVGDKEVILINNQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 267
            MD DFE   + +K K+ D      + Q++G E+LPR++  D+L+RLPI+SL++F+ VCR+
Sbjct: 1    MDLDFERHSKRRKTKLED------DPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRA 54

Query: 268  CYTLSHDPELPRLHHSMA-DKADPILVFHCDYPIRNQLYFVGYDGGDKI---VRKISTPF 435
               ++ DPE+  L+ S +  + DP ++ HCD+PIRN LYFV +   ++    V++I  PF
Sbjct: 55   WRAMALDPEVVNLYLSCSTQETDPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPF 114

Query: 436  SRSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFHP 615
            S  MPEF VVGSCNGLLCLSDSL+ + +Y++NPFT  + ELPKS Q+PDQEVVFGFGF+P
Sbjct: 115  SSMMPEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNP 174

Query: 616  VTNQYKXXXXXXXXXXXXLNQNNRS--YPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKEV 789
             TN+YK                +R   YP S+V +LT+G P WR LGKV Y+L R+A E 
Sbjct: 175  KTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASE- 233

Query: 790  VVVNGRLHWLSRPGRVGGLPGRTIVSFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLA 957
             +VNGRLHW+SRP R    P R +VSFDL DEQFR V KP    +NR +YHLAV+ GCL+
Sbjct: 234  TLVNGRLHWVSRPCR--NKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLS 291

Query: 958  AAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAKIPSHE----YGIWRKPMQEKMVR 1125
             AV C YG+LEIWVMKEY+VKESW K ++I G Y+ K           IW+     + VR
Sbjct: 292  VAVYCNYGRLEIWVMKEYNVKESWVKEYNI-GAYMPKGLKQNLVRPLKIWKNASNGRAVR 350

Query: 1126 VLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 1293
             LCVLKNGEIL+EY+  +LV YDPK  +FKD+   G PK FQT+VHVGSLNW  TP
Sbjct: 351  ALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWIDTP 406


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  404 bits (1038), Expect = e-110
 Identities = 217/417 (52%), Positives = 275/417 (65%), Gaps = 15/417 (3%)
 Frame = +1

Query: 88   MDSDFENEPRNKKMKVGDKEVILINNQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 267
            MD D E   + +K KV        + Q++G E+LPR++  D+L+RLPI+SL+QF+ VCR+
Sbjct: 1    MDLDCEKHRKRRKTKVE------YDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRA 54

Query: 268  CYTLSHDPELPRLHHSMA--DKADPILVFHCDYPIRNQLYFVGYDGGDKI---VRKISTP 432
               L  DP+L  L+ S +  D   P L+ HCD+PIRN LYFV +   ++    V++I  P
Sbjct: 55   WRALVQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAP 114

Query: 433  FSRSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFH 612
            FS  MPEF VVGSCNGLLCLSDSLY + +Y++NPFT  + ELPKS Q+PDQEVV GFGF+
Sbjct: 115  FSSMMPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFN 174

Query: 613  PVTNQYKXXXXXXXXXXXXLNQNNRS--YPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKE 786
            P T +YK                +R   YP SEV +LT+G P+WR LGKV Y+L R+A  
Sbjct: 175  PKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASG 234

Query: 787  VVVVNGRLHWLSRPGRVGGLPGRTIVSFDLKDEQFRLVSKP----VNRSNYHLAVIGGCL 954
              +VNGRLHW+SRP R    P R +VSFDL DEQFR VSKP    +NR NYHL V+ GCL
Sbjct: 235  -ALVNGRLHWISRPCR--NKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCL 291

Query: 955  AAAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAK----IPSHEYGIWRKPMQEKMV 1122
            +AAV C YG+LEIWVMKEY+VKESW K ++I G Y+ K        +  IW+     ++V
Sbjct: 292  SAAVYCNYGRLEIWVMKEYNVKESWVKEYNI-GAYMPKGLKQNQDRQLKIWKNSSNGRVV 350

Query: 1123 RVLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 1293
              LCVLKNGEIL+EY+   LV YDPK  +FKD+   G P  FQT+VHVGSLNW  TP
Sbjct: 351  GALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWIDTP 407


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  392 bits (1007), Expect = e-106
 Identities = 212/411 (51%), Positives = 271/411 (65%), Gaps = 13/411 (3%)
 Frame = +1

Query: 88   MDSDFENEPRNKKMKVGDKEVILINNQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 267
            MD DFE   +  + ++G  E      ++S  E LPRD++LD+L+RLP++SL+QFRFVCR 
Sbjct: 1    MDLDFEKPGKRARYEMGGGE----GPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRG 56

Query: 268  CYTLSHDPELPRLHHSMADKADPILVFHCDYPIRNQLYFVGYDGGDK---IVRKISTPFS 438
               ++ D  L   H     + +P L+ HCDYPIRNQ+ FV      +   +VRK++ PF 
Sbjct: 57   WRLMAQDSLLASKHLCRTAQYNPCLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFW 116

Query: 439  RSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFHPV 618
             SMPEF VVGSCNGLLCL+DSL+ + VYV NPFTR+  +LPKS Q+PDQEVVFGFG+HP+
Sbjct: 117  ASMPEFEVVGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPM 176

Query: 619  TNQYKXXXXXXXXXXXXLNQNNR--SYPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKEVV 792
            T  YK                 R  +  +SEV VLT+G P WR LGKV YQLDR   E  
Sbjct: 177  TEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSE-A 235

Query: 793  VVNGRLHWLSRPGRVGGLPGRTIVSFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLAA 960
            +VNGRLHW++RP R      R IVSFDL DEQFR + KP    ++R NYHL V+GGCL+A
Sbjct: 236  LVNGRLHWVTRPRR---YVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSA 292

Query: 961  AVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAK----IPSHEYGIWRKPMQEKMVRV 1128
            AV    GKLE+WVMKEYDVKESW K F+I G +L K      +  + IWR   + + VR+
Sbjct: 293  AVHRSNGKLEVWVMKEYDVKESWIKEFNI-GAHLPKGLKQDVNRPHRIWRNAPKGRGVRL 351

Query: 1129 LCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNW 1281
            LC+LKNGEIL+EY+G  LV Y+P+  +FKD+   G+P  FQT VHVGSL+W
Sbjct: 352  LCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSW 402


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  334 bits (857), Expect = 3e-89
 Identities = 183/396 (46%), Positives = 248/396 (62%), Gaps = 23/396 (5%)
 Frame = +1

Query: 175  GFEILPRDVLLDVLTRLPISSLIQFRFVCRSCYTLSHDPELPRLHHSMADKADPILVFHC 354
            G E LP D++ D+ +RLPISS+ +  FVCRS  ++    +  RL  S +    P L+ HC
Sbjct: 24   GLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVL--TQHGRLSSSSSSPTKPCLLLHC 81

Query: 355  DYPIRNQLYFVGYDGGDKIVR--KISTPFSRSMPEFNVVGSCNGLLCLSDSLYGEPVYVF 528
            D PIRN L+F+     +K ++  K +  F+ SMPEF+VVGSCNGLLCLSDSLY + +Y++
Sbjct: 82   DSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLY 141

Query: 529  NPFTRNHLELPK-SPQFPDQEVVFGFGFHPVTNQYKXXXXXXXXXXXXLN------QNNR 687
            NPFT N LELP+ S ++ DQE+VFGFGFH +T +YK             N      +   
Sbjct: 142  NPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRI 201

Query: 688  SYPKSEVHVLTIGEP------KWRCLGKVPYQLDRQAKEVVVVNGRLHWLSRPGRVGGLP 849
             Y +SEV +LT+          WR LGK PY+  +++ E +V NGRLH+++RP R   +P
Sbjct: 202  QYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALV-NGRLHFVTRPRR--HVP 258

Query: 850  GRTIVSFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLAAAVSCGYGKLEIWVMKEYDV 1017
             R  VSFDL+DE+F+ + KP    +NR+N+ L  + GCL A V   YGKL+IWVMK Y V
Sbjct: 259  DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGV 318

Query: 1018 KESWTKHFDIHGVYLAKIPSHEYG----IWRKPMQEKMVRVLCVLKNGEILMEYRGGSLV 1185
            KESW K + I G YL K           IW+     K+VRVLC+L+NGEIL+EY+   LV
Sbjct: 319  KESWGKEYSI-GTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLV 377

Query: 1186 KYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 1293
             YDPK  +FKD++FHG+P  F T+VH G+L+W  TP
Sbjct: 378  AYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTP 413


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328394|gb|EFH58813.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score =  330 bits (845), Expect = 7e-88
 Identities = 187/419 (44%), Positives = 255/419 (60%), Gaps = 23/419 (5%)
 Frame = +1

Query: 106  NEPRNKKMKVGDKEVILINNQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRSCYTLSH 285
            +E   KK K+ D    +      G E LP D++ D+ +RLPISS+ +  FVCRS  ++  
Sbjct: 3    SEKSFKKRKITDD---VDGGGGGGLESLPGDIIADIFSRLPISSIARLMFVCRSWRSIL- 58

Query: 286  DPELPRLHHSMADKADPILVFHCDYPIRNQLYFVGYDGGDKIVR--KISTPFSRSMPEFN 459
              +  R+  S +    P L+ HCD PIRN L+F+     +K ++  K +  F  SMPEF+
Sbjct: 59   -TQHGRVSSS-SSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFESSMPEFD 116

Query: 460  VVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPK-SPQFPDQEVVFGFGFHPVTNQYKX 636
            VVGSCNGLLCLSDSLY + +Y++NPFT N LELP+ S ++ DQE+VFGFGFH +T  YK 
Sbjct: 117  VVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKDYKV 176

Query: 637  XXXXXXXXXXXLN------QNNRSYPKSEVHVLTIGEP------KWRCLGKVPYQLDRQA 780
                        N      +    Y +SEV +LT+          WR LGK PY+  +++
Sbjct: 177  LKIVYFRGSSSSNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFMKRS 236

Query: 781  KEVVVVNGRLHWLSRPGRVGGLPGRTIVSFDLKDEQFRLVSKP----VNRSNYHLAVIGG 948
             E +V NGRLH+++RP R   +P R  VSFDL+DE+F+ + KP    +NR+N+ L  + G
Sbjct: 237  SEALV-NGRLHFVTRPRR--HVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKG 293

Query: 949  CLAAAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAKIPSHEYG----IWRKPMQEK 1116
            CL A V   YGKL+IWVM+ Y VKESW K + I G YL K           IW+     K
Sbjct: 294  CLCAVVYGNYGKLDIWVMETYGVKESWGKEYSI-GTYLPKGLKQNLDRPMWIWKNAENGK 352

Query: 1117 MVRVLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 1293
            +VRVLC+L+NGEIL+EY+   LV YDPK  +FKD++FHG+P  F T+VHVG+L+W  TP
Sbjct: 353  VVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHVGTLSWVDTP 411


Top