BLASTX nr result

ID: Atractylodes21_contig00018070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018070
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   556   e-156
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              551   e-154
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   551   e-154
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   532   e-149
gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein fr...   532   e-149

>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  556 bits (1432), Expect = e-156
 Identities = 278/334 (83%), Positives = 304/334 (91%)
 Frame = +3

Query: 3    RIVEFEATRDLSRIWLHVDMDAFYAAVETLSNPSLKGRPMAVGSMSMISTANYEARKFGV 182
            RIVE EA+RDLSRIWLHVDMDAFYAAVETLSNP+LKG+PMAVGSMSM+STANYEARKFGV
Sbjct: 88   RIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSMSMLSTANYEARKFGV 147

Query: 183  RAAMPGFIACKLCPELIFVPIDFKKYTYYSDLTRKVFQEYDPNFTAASLDEAYLDITKVC 362
            RAAMPGFIA KLCPELIFVP DFKKYTYYSDLTRKVF  YDPNF A SLDEAYLDIT+VC
Sbjct: 148  RAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFGRYDPNFIAGSLDEAYLDITEVC 207

Query: 363  KERNITGGEVAEELRQNVYEATGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIM 542
            +ERN+   E+A+ELR  VYE TGLTCSAGVAPNRLLAKVCSDINKPNGQ+VLPNDR+A+M
Sbjct: 208  RERNVKSEEIAQELRAGVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVM 267

Query: 543  TFISSLPIRKIGGIGKVTEHILKDVFEIKTCEDLLQKSSFLCALFSPSSADFFISVGLGL 722
            TF+SSLPIRKIGGIGKVTEHILK VF I TCE +L+KSS++CA FS S+ADFF SVGLGL
Sbjct: 268  TFVSSLPIRKIGGIGKVTEHILKGVFGINTCEQMLEKSSYICAFFSQSTADFFCSVGLGL 327

Query: 723  GGTDAPQVRSRKSISNERTFSATKDETFFYQKLDELAEMLSADMEKEGLYGRTLTLKLKT 902
            G TD+PQVR RKSIS+ERTFSATKDE   ++KL+ELAEMLSADM+KEGL GRTLTLKLKT
Sbjct: 328  GQTDSPQVRFRKSISSERTFSATKDEVLLHKKLEELAEMLSADMQKEGLSGRTLTLKLKT 387

Query: 903  ASFEVRTRAVTSQSYIRSSKDILKHASKLLKAEL 1004
            ASFEVRTRAVT Q YI SS+DILKHA KLL+AEL
Sbjct: 388  ASFEVRTRAVTLQKYISSSEDILKHAKKLLQAEL 421


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/334 (83%), Positives = 299/334 (89%)
 Frame = +3

Query: 3    RIVEFEATRDLSRIWLHVDMDAFYAAVETLSNPSLKGRPMAVGSMSMISTANYEARKFGV 182
            RI+E EATRDLSRIWLHVDMDAFYAAVETL NPSL+GRPMAVG MSMISTANYEARKFGV
Sbjct: 93   RILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVGGMSMISTANYEARKFGV 152

Query: 183  RAAMPGFIACKLCPELIFVPIDFKKYTYYSDLTRKVFQEYDPNFTAASLDEAYLDITKVC 362
            RAAMPGFIA KLCPELIFVP DFKKYTYYSDLTRKVFQ+YDPNF AASLDEAYLDIT+VC
Sbjct: 153  RAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVC 212

Query: 363  KERNITGGEVAEELRQNVYEATGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIM 542
             ER++T GE+AEELR +V+E TGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP++R+A+M
Sbjct: 213  NERDLTSGEIAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVM 272

Query: 543  TFISSLPIRKIGGIGKVTEHILKDVFEIKTCEDLLQKSSFLCALFSPSSADFFISVGLGL 722
            TFISSLPIRKIGGIGKVTEHIL  VF I TCE++LQK  FLCALFS SSADFF+SVGLGL
Sbjct: 273  TFISSLPIRKIGGIGKVTEHILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGL 332

Query: 723  GGTDAPQVRSRKSISNERTFSATKDETFFYQKLDELAEMLSADMEKEGLYGRTLTLKLKT 902
            G TD PQVR RKSISNERTFSAT D    YQKL EL+EMLS DM+KEGL GRTLTLKLKT
Sbjct: 333  GKTDTPQVRFRKSISNERTFSATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKT 392

Query: 903  ASFEVRTRAVTSQSYIRSSKDILKHASKLLKAEL 1004
            ASFEVR+RAVT Q YI S +DIL HA KLL AEL
Sbjct: 393  ASFEVRSRAVTMQKYICSREDILNHALKLLNAEL 426


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/334 (83%), Positives = 299/334 (89%)
 Frame = +3

Query: 3    RIVEFEATRDLSRIWLHVDMDAFYAAVETLSNPSLKGRPMAVGSMSMISTANYEARKFGV 182
            RI+E EATRDLSRIWLHVDMDAFYAAVETL NPSL+GRPMAVG MSMISTANYEARKFGV
Sbjct: 93   RILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVGGMSMISTANYEARKFGV 152

Query: 183  RAAMPGFIACKLCPELIFVPIDFKKYTYYSDLTRKVFQEYDPNFTAASLDEAYLDITKVC 362
            RAAMPGFIA KLCPELIFVP DFKKYTYYSDLTRKVFQ+YDPNF AASLDEAYLDIT+VC
Sbjct: 153  RAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVC 212

Query: 363  KERNITGGEVAEELRQNVYEATGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIM 542
             ER++T GE+AEELR +V+E TGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP++R+A+M
Sbjct: 213  NERDLTSGEIAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVM 272

Query: 543  TFISSLPIRKIGGIGKVTEHILKDVFEIKTCEDLLQKSSFLCALFSPSSADFFISVGLGL 722
            TFISSLPIRKIGGIGKVTEHIL  VF I TCE++LQK  FLCALFS SSADFF+SVGLGL
Sbjct: 273  TFISSLPIRKIGGIGKVTEHILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGL 332

Query: 723  GGTDAPQVRSRKSISNERTFSATKDETFFYQKLDELAEMLSADMEKEGLYGRTLTLKLKT 902
            G TD PQVR RKSISNERTFSAT D    YQKL EL+EMLS DM+KEGL GRTLTLKLKT
Sbjct: 333  GKTDTPQVRFRKSISNERTFSATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKT 392

Query: 903  ASFEVRTRAVTSQSYIRSSKDILKHASKLLKAEL 1004
            ASFEVR+RAVT Q YI S +DIL HA KLL AEL
Sbjct: 393  ASFEVRSRAVTMQKYICSREDILNHALKLLNAEL 426


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
            gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
            polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  532 bits (1371), Expect = e-149
 Identities = 269/334 (80%), Positives = 294/334 (88%)
 Frame = +3

Query: 3    RIVEFEATRDLSRIWLHVDMDAFYAAVETLSNPSLKGRPMAVGSMSMISTANYEARKFGV 182
            RI+E E+TRDLSRIWLHVDMDAFYAAVETLSNP LKG+PMAVGSMSM+STANYEARK+GV
Sbjct: 89   RILELESTRDLSRIWLHVDMDAFYAAVETLSNPLLKGKPMAVGSMSMLSTANYEARKYGV 148

Query: 183  RAAMPGFIACKLCPELIFVPIDFKKYTYYSDLTRKVFQEYDPNFTAASLDEAYLDITKVC 362
            RAAMPGFIA +LCPELI VP +F KY YYSDLTRKVF  YDPNF AASLDEAYLDIT+VC
Sbjct: 149  RAAMPGFIARRLCPELILVPTNFDKYNYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVC 208

Query: 363  KERNITGGEVAEELRQNVYEATGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIM 542
            KER +T  E+A++LR +++E TGLTCSAGVA NRLLAKVCSDINKPNGQF+LPNDR AI+
Sbjct: 209  KERGLTSEEIAKDLRTSIFEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAIV 268

Query: 543  TFISSLPIRKIGGIGKVTEHILKDVFEIKTCEDLLQKSSFLCALFSPSSADFFISVGLGL 722
            TFISSLPIRKIGGIGKVTEHILKD   I TCE++LQK   LCALFS SSADFF+SVGLGL
Sbjct: 269  TFISSLPIRKIGGIGKVTEHILKDALGINTCEEMLQKGGHLCALFSQSSADFFLSVGLGL 328

Query: 723  GGTDAPQVRSRKSISNERTFSATKDETFFYQKLDELAEMLSADMEKEGLYGRTLTLKLKT 902
            G TD PQVR RKSISNERTF+AT DE   +QKL +LAEMLS DMEKEGL GRTLTLKLKT
Sbjct: 329  GSTDTPQVRFRKSISNERTFAATTDERLIFQKLADLAEMLSMDMEKEGLTGRTLTLKLKT 388

Query: 903  ASFEVRTRAVTSQSYIRSSKDILKHASKLLKAEL 1004
            ASFEVRTRAVT Q YI SS DIL+ AS+LLKAEL
Sbjct: 389  ASFEVRTRAVTLQKYICSSSDILQQASRLLKAEL 422


>gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein from Homo sapiens gb|AF194973 and
            contains an IMS PF|00817 domain [Arabidopsis thaliana]
          Length = 435

 Score =  532 bits (1370), Expect = e-149
 Identities = 266/334 (79%), Positives = 297/334 (88%)
 Frame = +3

Query: 3    RIVEFEATRDLSRIWLHVDMDAFYAAVETLSNPSLKGRPMAVGSMSMISTANYEARKFGV 182
            RI+E EATRDLSRIWLHVDMDAFYAAVETLS+PS+KG+PMAVG +SMISTANYEARKFGV
Sbjct: 91   RILELEATRDLSRIWLHVDMDAFYAAVETLSDPSIKGKPMAVGGLSMISTANYEARKFGV 150

Query: 183  RAAMPGFIACKLCPELIFVPIDFKKYTYYSDLTRKVFQEYDPNFTAASLDEAYLDITKVC 362
            RAAMPGFIA KLCP+LIFVP+DF KYT+YSDLTRKVF+ YDP+F A SLDEAYLDIT+VC
Sbjct: 151  RAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVC 210

Query: 363  KERNITGGEVAEELRQNVYEATGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIM 542
            +ER ++GGE+AEELR +VY  TGLTCSAGVA NRLLAKVCSDINKPNGQFVL NDR  +M
Sbjct: 211  RERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVM 270

Query: 543  TFISSLPIRKIGGIGKVTEHILKDVFEIKTCEDLLQKSSFLCALFSPSSADFFISVGLGL 722
            TF+S LP+RKIGGIGKVTEHILKD   IKTCE+++QK S L ALFS SSADFF+SVGLGL
Sbjct: 271  TFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGL 330

Query: 723  GGTDAPQVRSRKSISNERTFSATKDETFFYQKLDELAEMLSADMEKEGLYGRTLTLKLKT 902
            GGT+ PQVRSRKSIS+ERTF+AT DE   Y KLDELAEMLS DM+KEGL  RTLTLKLKT
Sbjct: 331  GGTNTPQVRSRKSISSERTFAATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLKLKT 390

Query: 903  ASFEVRTRAVTSQSYIRSSKDILKHASKLLKAEL 1004
            ASFE+R+RAV+ Q Y  SS DILKHA+KLLKAEL
Sbjct: 391  ASFEIRSRAVSLQRYTCSSDDILKHATKLLKAEL 424


Top