BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018068
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   100   5e-19
emb|CBI37849.3| unnamed protein product [Vitis vinifera]              100   5e-19
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    88   2e-15
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops...    75   2e-11
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops...    75   2e-11

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  100 bits (248), Expect = 5e-19
 Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = -1

Query: 632 MDFDEYDYLEKMVEDPKPPKSEGRANGAEETDKNEDKERRQSSRHRSEKNND--DRRSKR 459
           MDFDEYDYLEK VE+P+  K +   NG +ET K+ +KER +SS+H+SE N+D  DRR KR
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60

Query: 458 AKSGEESR--DREKERGSSHHRSSPK 387
           +KSG++SR  DR KERGSSH RSS +
Sbjct: 61  SKSGDDSRDHDRRKERGSSHPRSSSR 86


>emb|CBI37849.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  100 bits (248), Expect = 5e-19
 Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = -1

Query: 632 MDFDEYDYLEKMVEDPKPPKSEGRANGAEETDKNEDKERRQSSRHRSEKNND--DRRSKR 459
           MDFDEYDYLEK VE+P+  K +   NG +ET K+ +KER +SS+H+SE N+D  DRR KR
Sbjct: 1   MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60

Query: 458 AKSGEESR--DREKERGSSHHRSSPK 387
           +KSG++SR  DR KERGSSH RSS +
Sbjct: 61  SKSGDDSRDHDRRKERGSSHPRSSSR 86


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
 Frame = -1

Query: 632 MDFDEYDYLEKMVEDPKPPKSEGRANGAEETDKNEDKERRQSSRHRSEK----NNDDRRS 465
           MDFDEY+YLEK VE+P+P K++  ANG +   K+ +K+  +SS+HRS +    ++D+RRS
Sbjct: 1   MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS 60

Query: 464 KRAKSGEESR--DREKERGSSHHRS 396
           KR KSG+ESR  D+ KERGSS  RS
Sbjct: 61  KRPKSGDESRDPDQRKERGSSRQRS 85


>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 610

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
 Frame = -1

Query: 632 MDFDEYDYLEKMVEDPKPPKSEGRANGAEETDKNEDKERRQSSRHRSEK------NNDDR 471
           MDFDEY+YLEK VE+P      G   G E+  K+E KER +SSRHR +K      + D R
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKV-KSEGKERSRSSRHRGDKKKERDEDEDGR 59

Query: 470 RSKRAKSGEESRDREKERGSSHHRSS 393
           RSKR++S   SR R++ER    HRSS
Sbjct: 60  RSKRSRSHHRSRSRDRER--DRHRSS 83


>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 599

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
 Frame = -1

Query: 632 MDFDEYDYLEKMVEDPKPPKSEGRANGAEETDKNEDKERRQSSRHRSEK------NNDDR 471
           MDFDEY+YLEK VE+P      G   G E+  K+E KER +SSRHR +K      + D R
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKV-KSEGKERSRSSRHRGDKKKERDEDEDGR 59

Query: 470 RSKRAKSGEESRDREKERGSSHHRSS 393
           RSKR++S   SR R++ER    HRSS
Sbjct: 60  RSKRSRSHHRSRSRDRER--DRHRSS 83