BLASTX nr result

ID: Atractylodes21_contig00018059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018059
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu...    99   2e-32
ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249...    97   9e-32
ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-31
ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc...    92   2e-30
ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-28

>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
           gi|223540200|gb|EEF41774.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 483

 Score = 98.6 bits (244), Expect(2) = 2e-32
 Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
 Frame = -2

Query: 566 RDFHGVIIEVLMAESKNA-HNLVATLVEPSLVSDVVGLEESAKDISEXXXXXXXXGDAAG 390
           +DFHG +I V MAESKN   +   + V+P+ V D  GLEE+A D+++        GDA+G
Sbjct: 86  KDFHGNLIGVFMAESKNKDEHAYNSEVDPNAVGDFGGLEETAGDMNDDGGRGRGKGDASG 145

Query: 389 NAPAKAWQQDGDWMCPNTRSVI*HCCSNVNFAFRGVCNRC 270
               KAWQQ+GDW+CPNT       CSNVNFAFRGVCNRC
Sbjct: 146 ----KAWQQEGDWLCPNT------SCSNVNFAFRGVCNRC 175



 Score = 67.8 bits (164), Expect(2) = 2e-32
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 654 FGTIGLLKKDKRTGRPKIWLYRDKATNEPKG 562
           FGTIGLLKKDKRTGRPKIWLYRDK TNEPKG
Sbjct: 34  FGTIGLLKKDKRTGRPKIWLYRDKLTNEPKG 64


>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
           gi|297738257|emb|CBI27458.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score = 96.7 bits (239), Expect(2) = 9e-32
 Identities = 55/106 (51%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
 Frame = -2

Query: 566 RDFHGVIIEVLMAESKN-------AHNLVATLVEPSLVSDVVGLEESAKDISEXXXXXXX 408
           +DFHG II V +AESKN       + N V  + +P   SD+ GLEE   D++        
Sbjct: 85  KDFHGSIIGVFIAESKNKDDHSYNSGNQVNDVGDPGAASDLRGLEEDPLDMNGSAGRGRG 144

Query: 407 XGDAAGNAPAKAWQQDGDWMCPNTRSVI*HCCSNVNFAFRGVCNRC 270
            GDAAG    KAWQQDGDW+CPNT       CSNVNFAFRGVCNRC
Sbjct: 145 RGDAAG----KAWQQDGDWLCPNT------SCSNVNFAFRGVCNRC 180



 Score = 67.4 bits (163), Expect(2) = 9e-32
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 654 FGTIGLLKKDKRTGRPKIWLYRDKATNEPKG 562
           FGTIGL+KKDKRTGRPKIWLYRDK TNEPKG
Sbjct: 33  FGTIGLIKKDKRTGRPKIWLYRDKVTNEPKG 63


>ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 95.5 bits (236), Expect(2) = 2e-31
 Identities = 51/99 (51%), Positives = 63/99 (63%)
 Frame = -2

Query: 566 RDFHGVIIEVLMAESKNAHNLVATLVEPSLVSDVVGLEESAKDISEXXXXXXXXGDAAGN 387
           +DFHG II V +A+SK+  + V   V+    +D  G EE+AKD++E         DA+G 
Sbjct: 85  KDFHGNIIGVFIAQSKSKDDTVYNSVDDP--NDFGGFEENAKDLNEGGGRGRGQDDASG- 141

Query: 386 APAKAWQQDGDWMCPNTRSVI*HCCSNVNFAFRGVCNRC 270
              KAWQQDGDW+CPNT       CSNVNFAFRGVCNRC
Sbjct: 142 ---KAWQQDGDWLCPNT------SCSNVNFAFRGVCNRC 171



 Score = 67.8 bits (164), Expect(2) = 2e-31
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 654 FGTIGLLKKDKRTGRPKIWLYRDKATNEPKG 562
           FGTIGLLKKDKRTGRPKIWLYRDK TNEPKG
Sbjct: 33  FGTIGLLKKDKRTGRPKIWLYRDKMTNEPKG 63


>ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus]
          Length = 396

 Score = 92.0 bits (227), Expect(2) = 2e-30
 Identities = 50/101 (49%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = -2

Query: 566 RDFHGVIIEVLMAESKNAHNLVATLVEPSLVS--DVVGLEESAKDISEXXXXXXXXGDAA 393
           +DFHG IIEV +AESK+  +L   +V   +V+  D +G EE+A  ++             
Sbjct: 85  KDFHGSIIEVHIAESKSKDDLSFNVVVDPIVAAGDDIGSEETAVGMNGGGGRGR----GR 140

Query: 392 GNAPAKAWQQDGDWMCPNTRSVI*HCCSNVNFAFRGVCNRC 270
           G+AP KAWQQ+GDW+CPNT       CSNVNFAFRGVCNRC
Sbjct: 141 GDAPGKAWQQEGDWLCPNT------SCSNVNFAFRGVCNRC 175



 Score = 67.4 bits (163), Expect(2) = 2e-30
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -1

Query: 654 FGTIGLLKKDKRTGRPKIWLYRDKATNEPKG 562
           FGTIG+LKKDKRTGRPKIWLYRDK+TNEPKG
Sbjct: 33  FGTIGVLKKDKRTGRPKIWLYRDKSTNEPKG 63


>ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|222864103|gb|EEF01234.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 85.5 bits (210), Expect(2) = 1e-28
 Identities = 49/99 (49%), Positives = 61/99 (61%)
 Frame = -2

Query: 566 RDFHGVIIEVLMAESKNAHNLVATLVEPSLVSDVVGLEESAKDISEXXXXXXXXGDAAGN 387
           +DFHG  I V +A+SK+  +     V+    S V  LEE+AKD++E        GDA+G 
Sbjct: 85  KDFHGNTIGVFIAQSKSKDDQAFNPVDDPNDSGV--LEENAKDLNEGGGRGRGRGDASG- 141

Query: 386 APAKAWQQDGDWMCPNTRSVI*HCCSNVNFAFRGVCNRC 270
              KAWQQ+GDW+CPNT       CSNVNFAFRGVCN C
Sbjct: 142 ---KAWQQEGDWLCPNT------SCSNVNFAFRGVCNLC 171



 Score = 67.8 bits (164), Expect(2) = 1e-28
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 654 FGTIGLLKKDKRTGRPKIWLYRDKATNEPKG 562
           FGTIGLLKKDKRTGRPKIWLYRDK TNEPKG
Sbjct: 33  FGTIGLLKKDKRTGRPKIWLYRDKMTNEPKG 63


Top