BLASTX nr result

ID: Atractylodes21_contig00018022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00018022
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521161.1| photosystem I reaction center subunit IV A, ...    61   1e-07
ref|XP_003625462.1| Photosystem I reaction center subunit IV A [...    58   7e-07
gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK...    58   9e-07

>ref|XP_002521161.1| photosystem I reaction center subunit IV A, chloroplast precursor
           [Ricinus communis] gi|223539730|gb|EEF41312.1|
           photosystem I reaction center subunit IV A, chloroplast
           precursor [Ricinus communis]
          Length = 141

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
 Frame = +1

Query: 46  MASCSMASAATGFVVTPNLTSNTN-TVKCNMVMLPL--HNTRGSRLVVRAAEEA 198
           MASCSMASAA+GF++TPN+ +NTN + + NMV  P   +N   SRLVVRAAEEA
Sbjct: 1   MASCSMASAASGFLLTPNVPANTNSSSRSNMVYFPSKNNNINNSRLVVRAAEEA 54


>ref|XP_003625462.1| Photosystem I reaction center subunit IV A [Medicago truncatula]
           gi|355500477|gb|AES81680.1| Photosystem I reaction
           center subunit IV A [Medicago truncatula]
           gi|388502410|gb|AFK39271.1| unknown [Medicago
           truncatula]
          Length = 138

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
 Frame = +1

Query: 46  MASCSMASAATGFVVTPN-LTSNTNT----VKCNMVMLPLHNTRGSRLVVRAAEEA 198
           MASC+MASAA+GFV++PN ++ NTNT     + NMVM P      SRLVVRA+EEA
Sbjct: 1   MASCNMASAASGFVLSPNNVSGNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEA 56


>gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK46371.1| unknown
           [Medicago truncatula]
          Length = 138

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
 Frame = +1

Query: 46  MASCSMASAATGFVVTPNLTS-NTNT----VKCNMVMLPLHNTRGSRLVVRAAEEA 198
           MASC+MASAA+GFV++PN  S NTNT     + NMVM P      SRLVVRA+EEA
Sbjct: 1   MASCNMASAASGFVLSPNNVSCNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEA 56


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