BLASTX nr result

ID: Atractylodes21_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017976
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
dbj|BAF49444.1| transcription factor DcMYB4 [Daucus carota]            56   4e-06
gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japo...    56   5e-06

>ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|222867542|gb|EEF04673.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 53/138 (38%), Positives = 67/138 (48%), Gaps = 29/138 (21%)
 Frame = +3

Query: 165 LGPMETYQAVKDSSALVMFGGDQASCSSNSDGSCHYEYGTVGHVYDH-----NNMGN--L 323
           +G M+ YQ VKD+  L+MFGG+ ASCSS SDGSC  +   V   Y+H     NN G   L
Sbjct: 202 VGSMQNYQ-VKDN--LIMFGGE-ASCSS-SDGSCSNQMSHVKEEYEHGDGANNNTGQVGL 256

Query: 324 QSEFDGNYE----------------------KEKGYYGDSSLDSSLEEIKQLISTNLCSS 437
           Q+      E                      K+ G + ++ LD  LEEIKQLIST+ C+ 
Sbjct: 257 QNYLHNRVEDDQKLMVSSGFAGHDVLNGWTGKQIGLWEENPLDYGLEEIKQLISTSSCN- 315

Query: 438 NIDNNLNFFVDETKEVEK 491
                 NF  DE K  EK
Sbjct: 316 ------NFLFDENKTAEK 327


>dbj|BAF49444.1| transcription factor DcMYB4 [Daucus carota]
          Length = 313

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
 Frame = +3

Query: 162 GLGPMETYQAVKDSSALVMFGG---DQASCSSNSDGSCHYEYGTVG--HVYDHNNMGNLQ 326
           GLGPM+ YQ  +  S L+MFGG   DQ + SS+S       +   G  ++ D     NL 
Sbjct: 196 GLGPMQNYQ--EKESPLIMFGGAGDDQQAASSSSYDEHFMMFSNCGMNNISDQQKQVNL- 252

Query: 327 SEFDGNYEKEKGYYGDSSLDSSLEEIKQLISTNLCSSNIDNNLNFFVDETKEV 485
               G++E         ++ S +EEIKQLIST   S N  +NL+FFVDE K V
Sbjct: 253 GVSSGDHEIVSNVLDQYNM-SCVEEIKQLISTTNLSCN--SNLSFFVDENKTV 302


>gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 224

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
 Frame = +3

Query: 171 PMETYQAVKDSSALVMFGGDQASCSSNSDGSCH------------YEYGTVGHV------ 296
           P + +Q    S++ V FGG+  SCSS+SDGSC+            Y  G VG        
Sbjct: 94  PPQKFQFQFSSNSFV-FGGETTSCSSSSDGSCNNKTSHVTEPDLGYGEGCVGSTFMEQIG 152

Query: 297 ---YDHNNMGNLQSEFDGN-------YEKEKGYYGDSSLDSSLEEIKQLISTNLCSSNID 446
              Y +N + + Q     N        EK+ G + ++ +D+ LEEIK+LIST+ C+    
Sbjct: 153 GVDYLYNGVEDTQKLMFNNGDGVSGWTEKQNGLWEENPMDNGLEEIKELISTSSCN---- 208

Query: 447 NNLNFFVDETKEVEKV 494
              NF   + K  EKV
Sbjct: 209 ---NFLFGDKKTEEKV 221


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