BLASTX nr result

ID: Atractylodes21_contig00017966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017966
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   327   2e-87
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   313   3e-83
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   310   1e-82
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   306   4e-81
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S...   294   1e-77

>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  327 bits (837), Expect = 2e-87
 Identities = 159/230 (69%), Positives = 190/230 (82%)
 Frame = -3

Query: 714 QSGVAFGYIHKGLRLANDEIARLRDRDLKNLFSDKKXXXXXXXXXXXLNSTRIMDVTQEE 535
           ++GV FGYIHKGLRLANDEI RLR+ D+KNL   +K           LNST++M +T EE
Sbjct: 131 ETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNSTQLMHLTAEE 190

Query: 534 GYLMNQSDPMQDALRGSLFKLDSMHMLTKLRPFVHTFLKEASKLFEMYIYTMGERAYALE 355
            YL +Q D MQD   GSLF +D MHM+TKLRPF+ TFLKEAS++FEMYIYTMG+RAYALE
Sbjct: 191 EYLKSQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIYTMGDRAYALE 250

Query: 354 MANLLDPGKIYFDSRVIAQSDCTQRHQKGLDVVLGQESAVLILDDTEAVWVKHKENLILM 175
           MA  LDPG+ YF++RVI++ D TQRHQKGLD+VLGQESAVLILDDTE  W KHK+NLILM
Sbjct: 251 MAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWTKHKDNLILM 310

Query: 174 ERYHFFASSCKQFGYRCKSLSELKSDESDVDGALATVLQVLKRIHSMFFD 25
           ERYHFFASSC+QFG+ CKSLS+LKSDE++ DGALA+VL+VL+RIH +FFD
Sbjct: 311 ERYHFFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFFD 360


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score =  313 bits (801), Expect = 3e-83
 Identities = 155/234 (66%), Positives = 185/234 (79%)
 Frame = -3

Query: 714 QSGVAFGYIHKGLRLANDEIARLRDRDLKNLFSDKKXXXXXXXXXXXLNSTRIMDVTQEE 535
           +SGV FGYIHK LRL NDEI R+R++++K L   KK           LNST +  +T EE
Sbjct: 102 ESGVTFGYIHKELRLNNDEINRMRNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEE 161

Query: 534 GYLMNQSDPMQDALRGSLFKLDSMHMLTKLRPFVHTFLKEASKLFEMYIYTMGERAYALE 355
            YL +Q+D + D  +GSLF L+S+H +TKLRPFVH+FLKEASKLFEMYIYTMGER YA E
Sbjct: 162 EYLRSQTDSLDDVTKGSLFLLNSVHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFE 221

Query: 354 MANLLDPGKIYFDSRVIAQSDCTQRHQKGLDVVLGQESAVLILDDTEAVWVKHKENLILM 175
           MA LLDP K YF S+VI++ D TQ+HQKGLDVVLG+ESAVLILDDTE  W KHKENLILM
Sbjct: 222 MAKLLDPKKEYFSSKVISRDDGTQKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILM 281

Query: 174 ERYHFFASSCKQFGYRCKSLSELKSDESDVDGALATVLQVLKRIHSMFFDPELG 13
           ERYHFFASSC+QFG+ CKSLSELK+DES+ DGAL T+L+VLK++H MFF+   G
Sbjct: 282 ERYHFFASSCRQFGFNCKSLSELKNDESETDGALTTILKVLKQVHHMFFNEVSG 335


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score =  310 bits (795), Expect = 1e-82
 Identities = 150/232 (64%), Positives = 189/232 (81%)
 Frame = -3

Query: 714 QSGVAFGYIHKGLRLANDEIARLRDRDLKNLFSDKKXXXXXXXXXXXLNSTRIMDVTQEE 535
           +SGV FGYIHKGLRL ++EI+RLR+ D+K+L   KK           LNST +  +T EE
Sbjct: 90  ESGVTFGYIHKGLRLHDEEISRLRNTDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEE 149

Query: 534 GYLMNQSDPMQDALRGSLFKLDSMHMLTKLRPFVHTFLKEASKLFEMYIYTMGERAYALE 355
            +L+NQ+D ++D  +GSLFKL+ M+M+TKLRPFV  FLKEAS++FEMYIYTMG+R YALE
Sbjct: 150 SHLLNQTDSLRDVSKGSLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALE 209

Query: 354 MANLLDPGKIYFDSRVIAQSDCTQRHQKGLDVVLGQESAVLILDDTEAVWVKHKENLILM 175
           MA LLDP   YF+++VI++ D TQ+HQKGLDVVLGQESAVLILDDTE  W+KHK+NLILM
Sbjct: 210 MAKLLDPQGEYFNAKVISRDDGTQKHQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILM 269

Query: 174 ERYHFFASSCKQFGYRCKSLSELKSDESDVDGALATVLQVLKRIHSMFFDPE 19
           ERYHFF SSC+QFG+ CKSL+ELKSDE++ DGALA +L+VLK++H MFFD +
Sbjct: 270 ERYHFFGSSCRQFGFNCKSLAELKSDENETDGALAKILKVLKQVHCMFFDKQ 321


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  306 bits (783), Expect = 4e-81
 Identities = 148/232 (63%), Positives = 187/232 (80%)
 Frame = -3

Query: 714 QSGVAFGYIHKGLRLANDEIARLRDRDLKNLFSDKKXXXXXXXXXXXLNSTRIMDVTQEE 535
           +SGV FGYIHKGLRL ++EI+RLR+ D+K+L   KK           LNST +  +T EE
Sbjct: 104 ESGVTFGYIHKGLRLHDEEISRLRNTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEE 163

Query: 534 GYLMNQSDPMQDALRGSLFKLDSMHMLTKLRPFVHTFLKEASKLFEMYIYTMGERAYALE 355
            +L+NQ+D + +  +GSLFKL+ M+M+TKLRPFV  FLKEAS++FEMYIYTMG+R YALE
Sbjct: 164 LHLLNQTDSLTNVSKGSLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALE 223

Query: 354 MANLLDPGKIYFDSRVIAQSDCTQRHQKGLDVVLGQESAVLILDDTEAVWVKHKENLILM 175
           MA LLDP   YF+++VI++ D TQ+HQKGLDVVLGQESAV+ILDDTE  W+KHK+NLILM
Sbjct: 224 MAKLLDPQGEYFNAKVISRDDGTQKHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILM 283

Query: 174 ERYHFFASSCKQFGYRCKSLSELKSDESDVDGALATVLQVLKRIHSMFFDPE 19
           ERYHFF SSC+QFG+ CKSL+ELKSDE + DGALA +L+VLK++H MFFD +
Sbjct: 284 ERYHFFGSSCRQFGFNCKSLAELKSDEDETDGALAKILKVLKQVHCMFFDKQ 335


>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
           gi|241915584|gb|EER88728.1| hypothetical protein
           SORBIDRAFT_10g025580 [Sorghum bicolor]
          Length = 558

 Score =  294 bits (753), Expect = 1e-77
 Identities = 149/229 (65%), Positives = 173/229 (75%)
 Frame = -3

Query: 711 SGVAFGYIHKGLRLANDEIARLRDRDLKNLFSDKKXXXXXXXXXXXLNSTRIMDVTQEEG 532
           SGVAFGYIHKGLRL   EI RLR  DLKNL  ++K           +NST++ D++  E 
Sbjct: 130 SGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQDISSAEK 189

Query: 531 YLMNQSDPMQDALRGSLFKLDSMHMLTKLRPFVHTFLKEASKLFEMYIYTMGERAYALEM 352
            L  Q+   +D    S+F LDSM MLTKLRPFV  FLKEAS +FEMYIYTMG++AYA+E+
Sbjct: 190 DLGIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLKEASNMFEMYIYTMGDKAYAIEI 249

Query: 351 ANLLDPGKIYFDSRVIAQSDCTQRHQKGLDVVLGQESAVLILDDTEAVWVKHKENLILME 172
           A LLDP  IYF S+VI+ SDCTQRHQKGLDV+LG ES  +ILDDTE VW KHKENLILME
Sbjct: 250 AKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILME 309

Query: 171 RYHFFASSCKQFGYRCKSLSELKSDESDVDGALATVLQVLKRIHSMFFD 25
           RYHFFASSC+QFG+  +SLSE   DE + DGALATVL VLKRIHS+FFD
Sbjct: 310 RYHFFASSCRQFGFGVRSLSESMQDERESDGALATVLDVLKRIHSIFFD 358


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