BLASTX nr result

ID: Atractylodes21_contig00017884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017884
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510204.1| DNA binding protein, putative [Ricinus commu...    74   1e-11
ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]                   71   8e-11
ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...    70   2e-10
gb|ABC47866.1| remorin [Glycine max]                                   69   4e-10

>ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis]
           gi|223550905|gb|EEF52391.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 601

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = +1

Query: 1   KLRSAQKKAQEMRESVLSNQSCQVARSSHKAISLIKTCQIRSLRGCFTCPAF 156
           KLRSAQK+AQEMR SVL+NQ+ QV+R+SHKAIS  +T Q+ SL GCFTC AF
Sbjct: 550 KLRSAQKRAQEMRSSVLTNQANQVSRTSHKAISFRRTRQMGSLSGCFTCHAF 601


>ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|222844160|gb|EEE81707.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = +1

Query: 1   KLRSAQKKAQEMRESVLSNQSCQVARSSHKAISLIKTCQIRSLRGCFTCPAF 156
           KLRSAQK+AQEMR SVL+NQ+ QV+ +S KAIS  +TCQ  SL GCFTC AF
Sbjct: 527 KLRSAQKRAQEMRSSVLANQAHQVSTNSRKAISFRRTCQKGSLSGCFTCHAF 578


>gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]
          Length = 565

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +1

Query: 1   KLRSAQKKAQEMRESVLSNQSCQVARSSHKAISLIKTCQIRSLRGCFTCPAF 156
           KLRSAQK+AQEMR SVL+NQ  QVAR+ +KA+S+ +T Q+ SL GCFTC AF
Sbjct: 514 KLRSAQKRAQEMRSSVLANQDNQVARTQYKAVSIRRTRQMGSLSGCFTCHAF 565


>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
           gi|302142306|emb|CBI19509.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/52 (65%), Positives = 42/52 (80%)
 Frame = +1

Query: 1   KLRSAQKKAQEMRESVLSNQSCQVARSSHKAISLIKTCQIRSLRGCFTCPAF 156
           KLRSAQ+KAQEMR SVL+N + QV+ ++HKA+S  KT Q+ SL GCFTC AF
Sbjct: 519 KLRSAQRKAQEMRSSVLANHAHQVSGNAHKAVSFCKTRQMSSLSGCFTCHAF 570


>gb|ABC47866.1| remorin [Glycine max]
          Length = 526

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = +1

Query: 1   KLRSAQKKAQEMRESVLSNQSCQVARSSHKAISLIKTCQIRSLRGCFTCPAF 156
           KLR AQKKAQEMR SV  NQ+ +V R+SHKA S ++T Q+RSL GCFTC  F
Sbjct: 475 KLRLAQKKAQEMRSSVPHNQTDRVVRTSHKASSFLRTSQMRSLSGCFTCHVF 526


Top